| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_68755 |
|---|
| Symbol | GAP1.2 |
|---|
| ID | 4850933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | - |
|---|
| Start bp | 483827 |
|---|
| End bp | 485859 |
|---|
| Gene Length | 2033 bp |
|---|
| Protein Length | 599 aa |
|---|
| Translation table | |
|---|
| GC content | 44% |
|---|
| IMG OID | 640392641 |
|---|
| Product | general amino acid permease |
|---|
| Protein accession | XP_001387730 |
|---|
| Protein GI | 126273894 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0833] Amino acid transporters |
|---|
| TIGRFAM ID | [TIGR00913] amino acid permease (yeast) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATTTGGACCT CAACGGAACT ATATAGTTTA GCTAGTTTTC GTTGCAGGTT TGTTTTGTAT
ATCACTCATA GGAATAGCAC TCTTATCCAT ACATTAGTCA TATTAGCCAG ACTCAGCTCC
ATCATTTTGC ATACCCGTTA ATCTACTTTC ATAATGGACG GTTCCAGTTA CGAAGACAAG
CAGTCCCAGA CTGGAGAAAA CTCCCACTTA GCCTCTACGG CTGTCTCCAG TTCACCTTAC
GAACAAAGTC AGGAGCAAAC CACTACCCAA GCCAGATGGC ACTCTTTTGT AGACTCCTTC
AAGCCAGCTA TAGAAACCGA GGTATTGTCG AAGAATAAGC GCTACAATGA TAATGAAGAC
GAAGAAGCTG ACATCTCGGA TATCCAGAGA ATCAACATCA ACACCTCCAA ATCTCATTTG
AAGAGAAAGT TGAAGAACAG ACACTTGCAA ATGATTGCAA TTGCTTCTGC TATTGGCCTG
GGTTTGCTCA TTGGTACTGG TTCCGCCTTG AGCACTGGTG GACCTGCTGG TATCTTGATT
GCCTGGGCAT TGACCGGTGC CTCTATTCTC TGCACTATCC AAGCCATGGC CGAATTGGCT
GTGACTTTCC CTATCAGTGG CTCATTCAAC GTCTATGCCA GCAGATTCAT CGACCCCAGT
GTAGGCTTCT CTGTCGCCTG GAACTACTTC TTCCAGTTCT TAGTATTGCT TCCTTTGGAA
TTGGTTGCTG GTTCCATCAC CATGAATTAC TGGAACACCT CCATCAATCC TGACGTATGG
GTTCTTATCT TCTACATTGT CGTATCTTCA ATCAACTTTT TTGGTGTCAG AGCCTACGGT
GAAGCTGAAT TTGTGTTTTC TACCTTGAAA GTTCTAGCCG TTATTGGCTT TATAATTGTG
TCTATCGTCT TGGCTGCTGG AGGTGGTCCG AATGGCCAGT ATCATGGCTC TCTTTACTGG
CACAACCCAG GTCCATTTGC CAATGGTTTC AAGGGTGTAG TCAGTGTCTT CATCACTGCT
GCTTTCAGTT TTGGTGGAAC AGAGTTGGTG GGTCTTACTG CTGCTGAAGC AGACCAGCCT
AGAAAATCTC TTCCAAAGGC TACCAAGCAG GTCTTCTGGA GAATCCTAAT GTTCTACATG
GTGTCGTTGA CTTTGATCAC TTTCCTTGTT CCATATACTT CCGACAGATT GTTGGGAGCA
TCTTCTGTTG ATGTCACTGC TTCACCTTTC GTTATTGCTA TCCAGAACGG AGGAATCAAG
GGCTTACCAT CAGTGATGAA TGCTGTTATC CTTATCTCTG TCATTTCAGT TGGTTCATCT
TCTGTTTATG CCACCTCTAG AACATTGACT GCCTTGGCTG AACAAGGTTT GGCTCCAAAG
ATTTGTGGAT ATGTTGATAG AGCAGGTAGA CCTTTGGTGG CCATCATTAT TACCAACATC
TTTGGGTTGC TCAGTTTCAT TGCTGCCAGT GGTAAGCAAG CCGAAGTGTT CACCTGGCTC
TTATCTATCT CAGCTATGAG TTCCATCTTC ACCTGGTTAT CCATCTGTCT TGCACATATC
AGATTCAGAA GAGCATTGGC TTCCCAAGGT AGGACGACTG ATGAGTTGTC CTTCACCTCC
CAAACTGGTG TTATTGGTTC ATGGTTTGGA GTTGTTTTGA ACACCCTTGT GATTATAGCC
GAGTTCTGGT TGTCCCTTTT TCCTTTGGGC GAATCACCCA ACGCTGAGGG CTTCTTTCAG
ACTTATCTTG GTTTTGTGAT CTTGATTGTT TTCTATGTGG GCCACAAGAT CTGGAGAAAG
AACTGGATTT TGTTTATCAG GGCCAAGGAT ATTGACGTAG ACTCGGGAAG AAGAGAAGCT
GATATTGAAG CTTTGAAGGA AGAGTTGGCT GAAGAAAGAG CTATTTTGAG ATCCAAGCCT
TTTTACTACA GAGTGTACCA CTTCTGGTGT TGAAATTTCG CAGCCATTAA ATTTTCAACT
TATAAAGGCA ATTGTATTAT AGTGTACCAT AGACAATAAA AGTACTTTCA ATG
|
|---|
| Protein sequence | MDGSSYEDKQ SQTGENSHLA STAVSSSPYE QSQEQTTTQA RWHSFVDSFK PAIETEVLSK
NKRYNDNEDE EADISDIQRI NINTSKSHLK RKLKNRHLQM IAIASAIGLG LLIGTGSALS
TGGPAGILIA WALTGASILC TIQAMAELAV TFPISGSFNV YASRFIDPSV GFSVAWNYFF
QFLVLLPLEL VAGSITMNYW NTSINPDVWV LIFYIVVSSI NFFGVRAYGE AEFVFSTLKV
LAVIGFIIVS IVLAAGGGPN GQYHGSLYWH NPGPFANGFK GVVSVFITAA FSFGGTELVG
LTAAEADQPR KSLPKATKQV FWRILMFYMV SLTLITFLVP YTSDRLLGAS SVDVTASPFV
IAIQNGGIKG LPSVMNAVIL ISVISVGSSS VYATSRTLTA LAEQGLAPKI CGYVDRAGRP
LVAIIITNIF GLLSFIAASG KQAEVFTWLL SISAMSSIFT WLSICLAHIR FRRALASQGR
TTDELSFTSQ TGVIGSWFGV VLNTLVIIAE FWLSLFPLGE SPNAEGFFQT YLGFVILIVF
YVGHKIWRKN WILFIRAKDI DVDSGRREAD IEALKEELAE ERAILRSKPF YYRVYHFWC
|
|---|
| |