| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_68747 |
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| Symbol | RLM1 |
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| ID | 4851331 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 1519243 |
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| End bp | 1521492 |
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| Gene Length | 2250 bp |
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| Protein Length | 517 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640393039 |
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| Product | transcription factor of the MADS box family |
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| Protein accession | XP_001387522 |
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| Protein GI | 126274372 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TGAAAAGAAA TCTCGTGCTG TAGACCGAGA CTGAAATTAA AAGTGTTTGT CAGCATCACG
TTCTTGAATA GTAGAGTGAA TCGTGTCTTG AAGTGTATCC ATCGTCATTT TATTTGGCTA
TTTACATTTG AGTTTTGATA TTGAAACCGA TATTGCCAAC ACTATCAACA AGGCACCCGA
CTATATCTGC TATTTTATCA TTAACATTTA CATTCTCAGT ACTTTTCGCA AATTTTTCAC
AAACAAGCGA GAGTCATACT AGTGATACTT TATTCAATTA ATTCAATTGA ACAATCATCA
TAACATTCGA AAACAGCCCG TACAATCAAA CAAAACATCG AGTAAGACTG AGTCTAACAA
CCACTCTGCA TTGTATCCAT CATACTATAA GACTATTTTA ACAATAATAA AAGTGATATA
GCACCATGGG CAGAAGAAAA ATAGAGATCC AGCCCTTGAC GGATGACAGA AACAGAACAG
TAACGTTTGT CAAACGTAAG GCTGGGCTTT TCAAGAAAGC ACACGAGTTG GCCGTGCTTT
GTCAGGTAGA TCTTGCGGTG ATCATAGTTG GTTCCAACAA CAAGATCTAC GAATTTTCGT
CTGTGGACAC CGGCGAATTG ATCAAATCGT ACCAGCATAC ATGTAAAACC AAGCAGCCGC
AGGAGCTGAA ACTGCCGGAG AACTACGGAA ACTACAGGAA GAAAAAGTTT CTAAATGAGT
CTTTGTCGAG AAAGTCTGGA GCGTCCGTGC TAGAAGAGGT TGATCATGAT ATGGATGAAA
ACGAGGTCGA TTCTGAATAC GATAGCGATT CACCAGAGCC TAAGAGACAC AAAAGATCGT
ACAGCGATTA CTCTAAGAAT ACTAATTCAA AGGTGTTCAA CAGCAACAGG CCGCCTCCAC
CACCTCCACC TCACCATATC TCTCTTTCAA ACATGCCTAC TTTCAACAAT CCTACAACGT
TTAGAATGAA AGAAGACGAC ATCAACACTC CTGGAAGCAC TGCTTCAAAT GCTACGGACA
AGGTCTCACA CAAGCGGGAT GACTCGACTT CTAGTAACCA AAGACCGGTG CTAAGAGTCC
AAATTCCAAC TGATGCCAAG AGTAATTCAC TGAATAACAA GAGCTCCATC AACGATAGTG
CCCGTACCAT TACTGCCATC GACACCAACA TGCAAAATAC GTCTGTAACA GGTTCAGGAA
ACAGCAATTC CAATGCGGGT AGTAAAAATG GCAATGATAG TACCAGTTCG CACGAGGGAG
ACAATAGCTC TGATGTAAAT GGTTCATCCA ATATTCAGAC CAATGCCAGT AGCAACAACT
CCATAATAGT TGGCGGCAAC AACCATAACA TCAACAATAA CCAGAACAAT CTTAACATCA
ACAATAATCA TATTAACCAG AATCATAACC AAAATCATAC TAATAATAGT AACTTGCCGA
ACATCAACAC CCCGAAATAC TCGAGCTTTG CATCGTTCAG ATCACCTGAT TCACGTAAAC
CAACGCTACC TCTACCTATA CAATCAAAGT CACAGACTTC ATCACCTGCC AGTGCCACGG
CTCCTCCTTT GCCAATCGTT AATAACGGAG CCAACATGGC CATTAACAGT AATGTAGCCA
ACCCTAACGC CATGTACTAC TCATCTATAC CCCAGGGATC ACCGTCAAAT CCATATCCCA
ATGGAATTCT CCCAACACCC ATACTTAACC AGGTATTCAA CCAACAGTAT GGTCAGCAGC
TTGCGAATGG AAATGATCCT CATTCTGGGA ATGCAAAGTT CCGACCTCCA ATATTCACCA
ACTTACCCAA CAACGTTGGA GAACAGACTC CTATTTCGGG ACTTCCCTCG AGATATGTCA
ACGACATGTT TCCATCGCCT TCCAACTTCT ACGCACCTCA AGATTGGCCT AGTGGAAACA
CTGGAATGAC GCCCATCCAT GCCAACATCC CTCAATACTT CATGAACATG TTACCCTCGG
CCGGTCCGTC CAGCGCATTT CCGGGAAATC CAGGGACCAA GTTGCCTGCG AATGTACAGC
AGCAACAGAC ATCTCCAGCT CCCGCAACAG TGCCTCCTAA AGACGGACCT CTTTCACCAA
CTATCTTCAT GGGAACGAAT GCGAAGATTA AGCTAGAGGA GAAGAAGGAT AGTAAGTGAG
ACTGCCACTT TAGCAGTATA ACTTGTACTT ATAGACATAT ACCTTTTGAA ACGAGATCCA
ATGAACATTT ACCAGAGATG AGTAGCACAC
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| Protein sequence | MGRRKIEIQP LTDDRNRTVT FVKRKAGLFK KAHELAVLCQ VDLAVIIVGS NNKIYEFSSV
DTGELIKSYQ HTCKTKQPQE LKLPENYGNY RKKKFLNESL SRKSGASVLE EVDHDMDENE
VDSEYDSDSP EPKRHKRSYS DYSKNTNSKV FNSNRPPPPP PPHHISLSNM PTFNNPTTFR
MKEDDINTPG STASNATDKV SHKRDDSTSS NQRPVLRVQI PTDAKSNSLN NKSSINDSAR
TITAIDTNMQ NTSNNLNINN NHINQNHNQN HTNNSNLPNI NTPKYSSFAS FRSPDSRKPT
LPLPIQSKSQ TSSPASATAP PLPIVNNGAN MAINSNVANP NAMYYSSIPQ GSPSNPYPNG
ILPTPILNQV FNQQYGQQLA NGNDPHSGNA KFRPPIFTNL PNNVGEQTPI SGLPSRYVND
MFPSPSNFYA PQDWPSGNTG MTPIHANIPQ YFMNMLPSAG PSSAFPGNPG TKLPANVQQQ
QTSPAPATVP PKDGPLSPTI FMGTNAKIKL EEKKDSK
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