| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_66703 |
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| Symbol | NUP49 |
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| ID | 4851921 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 3189175 |
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| End bp | 3190637 |
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| Gene Length | 1463 bp |
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| Protein Length | 402 aa |
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| Translation table | |
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| GC content | 44% |
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| IMG OID | 640393629 |
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| Product | Nucleoporin NUP49/NSP49 (Nuclear pore protein NUP49/NSP49) |
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| Protein accession | XP_001386936 |
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| Protein GI | 126276026 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTTTGGTTTA GGAAAAGAAC TCACAAGGAT AGAATATCAT CATATGTTTG GAACTGCCAA
TAATTCACAG GCTCCAACGT CCGGTTTCGG TTTTGGTGGT GCCAATTCTA CCGGTTCAGG
CTTCGGAGCC AAACCCAGTG GAGGTCTTTT TGGCGCCAAT CAAACAACAA ATACCGGCCC
AGGCACTTTT GGCAGTGGAA ATGCCTTTGG AAACAATGCC AATAACCAAC AGACAGCAGG
ATCTGGTGGC TTGTTTGGCG CTTCTGGCCA GAATCAACAG CAGCCGACAC AGAACCAGAA
CCAACAAGGA GGAGGATTGT TTGGAAGCAA TAGCAATACG GCCGGAACTA GTAGTGGAGG
TCTTTTCGGA AGCAAACCTG CCGCTGGTGG ATTATTTGGT GGTTCCACTG GGGCTGCTAC
GACAGGTCTT TTTGGAGGTC AAAACCAAAC TCAAAATCCA CAAAACCAGC AAAACCAACA
GAATACGGGA CTTTTTGGTA GTAAACCTGC TGTTGGCGGT GGATTATTTG GAGCAAGTAC
AAGTGGACAG ACTCCTGCTG CGACCGGCGG CTTATTTGGT GGAAATACGG CTAACACGGC
CTCTTCTACC ATGGGTGGAG GGTTATTTGG AGGATCTGCA GTAGGAAATA CACAGCAGAA
CAAACCACTT TTTGGAGGAT TGGGCGCTTC TGGTAGCTCT GGAACAACTG GAGGTTTGTT
CGGAGGTTCG ACTGCAAATC CTGGTGGCTT GTTCTCTCAA CAGAATCAAA ATCAACAGAA
TCAATTTCAA CAACAACAAC AGAATCAGCA ACAAAATCAA CAGCAGTTGA CTGCAATGAC
GAGAGTGGGC GATTTGCCTC CGGCTATAAG GCAAGAGCTC GAGGAGTTTG ATCGTTACAT
TAACAAGCAA CATCTTGTAG CGACTACTTT ACAAGCTGAC TATGGCAAAC ACGACCAGCT
CATCAATACT ATTCCCAAGG ATATCAATTA TCTTCATAAC AAGCTTATGT CGACAAAACA
GGCGCTTAAA TTCGACTCTG GACAACTAGT TCATCTCAAG GAGCTCAATA ACGAAATCAC
AGACGACATC TCAAAGATAA TGCAACTCAT ATTACAGTTA TCTACACCTG GAACACGTCT
TTCTTCTTCT TTCCAGTTAA ATGAATTCTT TGTCAAGAAG ATCAAGAAGT ACTACGAGAT
TTTGCGTCAG TACGAGGGAG TCGTCGCTGA ACTAGATTCA ATTCTCGGTG GCTTGGAAAG
ACTGTGTACG GAAGGTTTTG GTAACTTGTT TAATATAGTA GAGGTTATCA AGTCGCAGTA
CCATTTGTTC ATGGAGTTGT GTGAAACGAT GGCTCAACTT CATAATGAGG TGAACAAGTT
GTCGAAGTAG GATCACGATG TATTATAATA AAGCAGCATA GATAGCAGTA GACTATCATA
AAAAGTGAGA TATTCTGTTA TGG
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| Protein sequence | MFGTANNSQA PTSGFGFGGA NSTGSGFGAK PSGGLFGANQ TTNTGPGTFG SGNAFGNNAN
NQQTAGSGGL FGASGQNQQQ PTQNQNQQGG GLFGSNSNTA GTSSGGLFGS KPAAGGLFGG
STGAATTGLF GGQNQTQNPQ NQQNQQNTGL FGSKPAVGGG LFGASTSGQT PAATGGLFGG
NTANTASSTM GGGLFGGSAN QFQQQQQNQQ QNQQQLTAMT RVGDLPPAIR QELEEFDRYI
NKQHLVATTL QADYGKHDQL INTIPKDINY LHNKLMSTKQ ALKFDSGQLV HLKELNNEIT
DDISKIMQLI LQLSTPGTRL SSSFQLNEFF VKKIKKYYEI LRQYEGVVAE LDSILGGLER
LCTEGFGNLF NIVEVIKSQY HLFMELCETM AQLHNEVNKL SK
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