| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_66693 |
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| Symbol | SNT1 |
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| ID | 4851901 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 3136548 |
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| End bp | 3140798 |
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| Gene Length | 4251 bp |
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| Protein Length | 1155 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640393609 |
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| Product | DNA-binding protein SNT1 |
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| Protein accession | XP_001387167 |
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| Protein GI | 126275963 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.860131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTTTACGGAT TCTCCATACT GTTTGCATCT GCCAAAGTGC ATTCGACCCA CCCCGGCTCT
AGGCACCTGC TCCCCAACAA GTGCCCATCC CGTGAAAAAT TCTTACTGTT ATTATTGCCA
TACTACTGTA ATTAGTATTA CTGTCATAGA ATAATCTTCA CCGTATAACC ATCACAATAT
ACCATTTACA CATCGGTACC ATACACCACC TACTACGTCA GCATACTATC ATTATATATC
AGTGTCATAT ACCATTTGCA ATATCGGCAA TCCCTCTATT TGATTTCATA TCTACTGTAA
TACTAGCATG TCTTCTTCTG GCTCCAGGGG ACCTCCCCCC AACCGATACT ACGAACGAAA
CGAATATAAC GAGTACGGCC GTTCCCGACG GAAGAACTTC TACTCGTCTA ATGCCTCATC
TCGTCGAGAT TACAAAAGCA GCGGTCCTGG CTCCTCGTCA CTTTCTCACT CTAAACTTAA
CACAAATAAC GAAGCAATAC CGTCTTCTTC TTCCAACTTA GCCAATTCTT CGACAACGCA
AAACTCCGTC GGCTCGAGCC CGAATGCCAG CAACAATTCT GGAAGAAGTT CATTTGGTAC
TGGCCCAAAT GTACGAGATA GTCGTAACAA CTCCTCTTCT TACGGCAACA CCAATAATCC
AAAGACCTAC GGAAAGCACA CGGGGGTCAG CTCAAACTCA CCAAACAGTG GCCAATCATC
GTACACATCA TATTATCCCA GCTATGGTAA ATACGGCAAT TTCACGTCGT CATCCGCTTC
AGCCAATACA ACCAGTCCTA ACGCCGATAC ATCTACTGGC TTCTATGGTT CTCGTAGTGA
CTCGTGGCGG TCAGATCGAA TCAAATCCGG CGACTCGCGT TTATCTTCGT CTAATAAACA
AGTTTCTTCA ACTTACAATT CCCGATTTCC TTCTAATAGC CTTGCAGGAA ACGACTACCG
CAAAGACAAA TACGATTCTT CATACGCTCA AGCTGGTCCG ACGGATACTT CAGCTAATCT
CTCTGGAACC AACAACCTCA GATGGAAATC ATCCAATAGC GTGCCGACTT ATAACTCCAA
CAAGGTGCCT ATTGCTGGTA CTAGAGGTTC TTTGTCAGGA TCTGTAGGAT CAAGGTACTC
CGCCAAAGAT CGAGCTCGAG GTTCTTTTTC GTCTGGTGGA GGCTCTTCAG CGTTAGTCAA
TAGTGGTACA AAAAGATCGG GGGATACTTA CTACCCATCT GGTAGAAATT CATATGGCTC
TGCTGCAAAC TATGGCCAAT TATCCAAACC ACAAGAACGG TTTTCTTCTG TGAAGACTAG
TGACCGTGAC TATACAAAAC CAAGAGTAGT GAGCACGGGA AGTTCTTACG ATGAAGAAGA
TACTTTGGAC GAGCTTCGTG ACAAAGAAAG AAGTGCAAGT ACAGATATTG AGAAGTCGTC
AATAATGAAG AAGGAGTCTA GTGACGATTA TTCTCCTTCC CCTGGGTTTG ATATAGACAC
AAAATCTGAA ATCGGCAAGA CCGATCAAGA TGAGCAAACA GAGGAAGAGA TGAAGCTCGA
GCAGAATGAC ATGGATGAAG ATGATCAAGA CCTTGATGAA GAAGACGACG AAGATCTACA
GGAAGAAAAC GACGACAAGT CCAAGATTGA AATAGAAATA GAAACGAAAT ATGAAGGTGA
TATTCGCGTT GCTGTTGAGA AAACAGAAGT ACCTGAAGTT GTCAAGATTG ATGTTTCCAA
TGAAATATGC TACCCAGAAG GATGTAAGTA TCCTTTAACC AAGATTGAAA CTGAGTTTGA
ACTTTTAGAG AAAGAGTTTG AACATAAACT AGAAGAAAGT GGATCTTTAA AATATACCTT
ATACCAACCA ATTGAGGATT TCAACGACTA TCCTTTCTTT TCAAAAGCAT TCAAGAGATT
CGTATTGTCG AGAGCTGCCT TGATTGATAA GTTGAAAACA CGTAACAAGG CGATTAATAG
AAAGAGATTG ACATTGTGGA ACGACTACAA AAATGGCCAC GACAGATGGG AAGTAGAGAG
GAAGAAAATG GAACAGCAGT TGCGATTGCT TCATCCTCCA GACGATGAAA TGAGGCGAGA
GATCGATTCT AGTGACAATA GAAAACAGTT TCAGCGCCAA TTTAGTTCAC CTGAGAATCC
TGCAGACTCT GCGCCCGGTG GAGCTCCAAA TCGTCGTGGT AGAAGGCATG GAGATTTAGT
AACTACGGAA GCAGAGTTTC AAGAAATTTT AAAGTCTTTG GGTGAAGAAC AAGATGAGGA
TCCATTGATT AAGGCTGAAA GAGTTGCAGC TGAGATTCCA GAATTGATTC TCGACCCAGT
TATGAGAGAC GACTTCAAGT ATATGAACTC CAACAATATT GTAAAAGATA GAGAAGGTTG
GACACATAGA GTCAAAACAG ATTTCGTCAA CAACTTCTCA CCTACGGAGC ACCAGCTTTT
CTGCGAAGGA TTCTGTTTGT ATCCCAAGAG ATTTGGGGCC ATTTCGCGTC ATATGGGGGG
TTTAAGAACA GCCTCGGACT GTGTGATTCA CTACTACATA ACGAAGAAGG CTGTCAATTA
TAAACAGTTG TTGGCTCAAT TCAAGAAAAA GAGTACTAAG AAGGCTGGAC GTCGTGGAAA
GCAAGGGAGA TCAAGAAATG TTTCACAAAC ACAGACTCCA GTTTCAACTC CAATAAGAGA
CACAGCCAGC GTTTCTGATG AAAGCATAGA CTCCAGATTG GCTCCTCCCC TTTCTGTGAC
AGACTCTCAG GCATTTTCCG AGGAACTATT TACGGATACT GGTCGCAGAA AGCGTGCTGC
TGCTCCTGTA TTCGATGGCA AGCCAAAGAA ACCAGAAGCC ACGGCTATTG TAGAAGAATT
GAGTATAGAA AATGGGGTCA GTACTCCACC TAAGAAGAAA CAGAGAAAGA GAAAGGAAGA
CGGAGTTGAG TCGGTGGTTA CTCCACAGGC TAATGGGGTT GTGGATCGCA TTGGTGATGA
AACTCAGAAA GTTGACTTTC CTGTACCTCC AAGCGATCTT CAATCTGACA GTGGTATGAC
TGATCCTGAA AGTAAGGAAC GCCGTAGAAC CATTTCTAGC TACTGGAGCA TAACTGAAGC
CACGATGTTT CCACATTTGT TAAATGAACA TGGCACGAAA TGGACTACCA TAGCTGATAA
GTTGACAACC AAAACAGCCA CAATGGTGCG CAACTATTTC CAGAGAAATG CAGAGAAGAA
TGGCTGGAAT AAGGCAGCAC GCGATGCTGA TGAAAGATTG GAGGCTAAGT TTGCTGCTGT
ACTCAATCCC AAAGCAGACG GTTCAGAAGA TACACCTGAA GATGGATTCA ATGAATATCA
AGATGGCCAA TTTCTGCAAG AACAAACTGA ACTACAACAG CAACGGCAGA TTGCACAACA
GCAAGATGTT GAACAGCAAC AATTGCAACA GCAGCAACTT CAACAGCAAC GACAATATCA
GCAACAAGAA CAACAAGATC AACAAGAACA GAGGGAACAG CGACAACAAC AATATCAAGT
TGAGCAGCGA CAATATCAAG CTGAACAATA TCAACAACAA CCTCTTCCTC AACATATTAG
AGTACATGAA GACCCAATCA TCCGTCAGTA TATTCCCATG GGTACATTTC AGCATGCACC
ACCAATTCAA GAGCCTCCTT TGCCAACAGT TAGGACACAT GTAGCTCCAC TCAGCAATTT
GTTGTCGTCG GATACTTCGT CTGTTCCAGT GTCTATAAAA GTAGAACAAC AAGCCACAGT
AGCACCACCA TACAAGGCTC AAGTTTATCA ACAACCAACT CTTCCTATCC ATCATGATAA
ACCTGCATTG CCTCCAATTT TTTCTAGACC ACAAGTGGCA TCTCAGCCTC ACAAGGCATC
CATCATGAGC TTGTTGAATT CTGACTCCAG TCCAGTCAAG GTAGAGCCGG TTATGAAGCC
TCCAATACTT CCGACTCCTC GTAAGAATAG TCTCAACGAT TTGCTCAACT CGCCTTCGTC
GTTTCCAGCA TACACCCCAA TAGGCTCTAA CGGAAACGCT CCTACTGTTC CCAAGCGTAA
CGGTATAGCC TCTTTGCTTT CTGCTGACGC GGACTCTACT TCTTCAGGAA ATGGAGGAAA
TAGCAATCAG CATCCATGAG GAGCTATATA AGTGAGGTTA CAGGCGATTG GGTACTCTTC
TGCTTTTGTA TTATAATGAC TAGGTTAGGG ATATAATAGA TAATGATGAT G
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| Protein sequence | MSSSGSRGPP PNRYYERNEY NEYGRSRRKN FYSSNASSRR DYKSSGPGSS SLSHSKLNTN
NEAIPPNASN NSGRSSFGTG PNVRDSRNNS SSYGNTNNPK TYGKHTGVSS NSPNSGQSSY
TSYYPSYGKY GNFTSSSASA NTTSPNADTS TGFYGSRSDS WRSDRIKSGD SRLSSSNKQV
SSTYNSRFPS NSLAGNDYRK DKYDSSYAQA GPTDTSANLS GTNNLRWKSS NSVPTYNSNK
VPIAGTRGSL SGSVGSRYSA KDRARGSFSS GGGSSALVNS GTKRSGDTYY PSGRNSYGSA
ANYGQLSKPQ ERFSSVKTSD RDYTKPRVSS IMKKESSDDY SPSPGFDIDT KSEIGKTDQD
EQTEEEMKLE QNDMDEDDQD LDEEDDEDLQ EENDDKSKIE IEIETKYEGD IRVAVEKTEV
PEVVKIDVSN EICYPEGCKY PLTKIETEFE LLEKEFEHKL EESGSLKYTL YQPIEDFNDY
PFFSKAFKRF VLSRAALIDK LKTRNKAINR KRLTLWNDYK NGHDRWEVER KKMEQQLRLL
HPPDDEMRRE IDSSDNRKQF QRQFSSPENP ADSAPGGAPN RRGRRHGDLV TTEAEFQEIL
KSLGEEQDED PLIKAERVAA EIPELILDPV MRDDFKYMNS NNIVKDREGW THRVKTDFVN
NFSPTEHQLF CEGFCLYPKR FGAISRHMGG LRTASDCVIH YYITKKAVNY KQLLAQFKKK
STKKAGRRGK QGRSRNVSQT QTPVSTPIRD TASVSDESID SRLAPPLSVT DSQAFSEELF
TDTGRRKRAA APVFDGKPKK PEATAIVEEL SIENGVSTPP KKKQRKRKED GVESVVTPQA
NGVVDRIGDE TQKVDFPVPP SDLQSDSGMT DPESKERRRT ISSYWSITEA TMFPHLLNEH
GTKWTTIADK LTTKTATMVR NYFQRNAEKN GWNKAARDAD ERLEAKFAAV LNPKADVEQR
QYQAEQYQQQ PLPQHIRVHE DPIIRQYIPM GTFQHAPPIQ EPPLPTVRTH VAPLSNLLSS
DTSSVPVSIK VEQQATVAPP YKAQVYQQPT LPIHHDKPAL PPIFSRPQAS IMSLLNSDSS
PVKVEPVMKP PILPTPRKNS LNDLLNSPSS FPAYTPIGSN GNAPTVPKRN GIASLLSADA
DSTSSGNGGN SNQHP
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