| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_66638 |
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| Symbol | SSN6 |
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| ID | 4851780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 2808834 |
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| End bp | 2813094 |
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| Gene Length | 4261 bp |
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| Protein Length | 815 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | 640393488 |
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| Product | glucose repression mediator protein |
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| Protein accession | XP_001386876 |
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| Protein GI | 126275579 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GGCGAATGGC CCCCAGCTCC AGCGGCCACC GAGACGGATC CCAGCAGCAG AAGGACCCGG
CGCCAACACT GGGGCCACAA TCTGGGCCCA GCTAGGCCCA GGTACGCTAC CTCTGGCTCC
GGAATATAAC CGCAATATAC GATCTCCCCC CCATGAATTT TTTCACTCAC TAAGCATCAC
TTAATTTTTT TCTTCGGCGG CGCTTTATTT GTTTGTGCTC GGTGCGTTTC TGTCTATTCT
GTATATATAG AGATGCGTCG TCCAGTTGAG AATTGGGCAA GATTTTATTC TCATTTTCAG
GGCAGCAGAT TTGATAGAGC GATTGTAACT TTCTCCTGGA AGAATAGGAA TCGGACGCGA
ACAAGCCCGC TGAAGCATTT ATCGACTGTT CACTGTTGAC CGACTACTGC TTCGACATCT
GCCTACTCTT TCGACCCGAT TGACATTCCT GGTCTTGTAC TATTATTATC GCAGCTGGAT
TTTGCTTCCA CCCGCCAGAA TTTGTCGCTA CGCCGCCTAC CACCACGGCC CTTCCACACT
CGACACCACC ATCTCTGTGC CGTGTCCAGA CGTATCTAGA TCGTGAGCTC AACTTCTCCA
CGTCCGTATT GAAATCGTAG CCGTGTCCAA TTTTCAGTAG AGCTCGATTC CACGACACAA
ATACATTTAC ATTCCATCAC CAATTCCACC GATTTCCATC ATACCATAAT CGCAATCTCA
CAAGGACGTT ACGGAATTTT GCCTACACCA GATCAAGTCG ATATATTTAA TCATACCAAG
TTTCGGTATT CCATATTTAA CTACTGCTTC TAATTCCGTC ATTTCTGCGG ATATTTATTA
ATACTTCTAA AATCGGTTCG CTCATTCACA TCCAACACAG CCATGCTGAT GAGTCTAAAT
AAACCCCTCA ACGGCCTGCT CCACCATGTC CACCACTCGC CCAGCTTGAC CCAACACGAG
TTATCGCAAC AGCAACAGCC TATGCTAGCA CCACCTCCTC CAGGCTCTGT GGCTCCCCCA
CCACCACCTC CACTGGCTGC TGCTGCTGCC GCCGCTGCTG CAGCTTCTGT CGGAGCTCCC
AATATCCTCA GCGAGACGAC GGCAGCTACG TGGCTTGCTA TTGGTTCACT TGCAGAGTCG
CTTGGCGACA TCGATAAGGC TCTAGCTTCG TACGACTCGG CTCTAAGACA CTCGCCCAAC
AATCCCGAGG CACTCATCAA ACTCGCCAAC ATCTACCGCT CCAAAGACGT TTTCTTCAAG
GCTGCTGAGC TCTACGAACA GGCACTTAAC TATAATCCTG AGAACGGTGA AACCTGGGGA
CTCTTGGGCC ATTGTTACTT GATGCTCGAC GACTTGCAAA GAGCCTATGC CGCTTACCAA
AGGGCTCTTT ACTACTTGGA CAACCCCAAT GTGCCCAAAT TGTGGCACGG AATCGGAATC
TTATACGACC GTTACGGCTC TCTTGAGTAT GCCGAAGAAG CCTTTGTCAG AGTCTTGGAG
TTGGACCCCA ATTTCGACAA GGCCAACGAG ATCTACTTCC GTTTGGGAAT CATTTACAAG
CACCAAGGAA AGTTGCAACT GGCTCTTGAG TGTTTCCAGT ACATCTTGAA CAACCCACCC
CATCCATTGA CTCAGCCAGA TGTCTGGTTC CAGATCGGCT CAGTCTTGGA ACAGCAGAAG
GACTGGGTAG GAGCCAAAGA TGCCTATGAA AAAGTACTCC AGGTCAATCC ACAGCACGCT
AAGGTGTTGC AGCAATTGGG CTGTTTATAC TCACAGGCAG AATCGAGCCC TTCTACACCT
TCACAAAATG GATCTGGCGC GGCTCAACCG TTCCAGCAAG ACTTGAACAT TGCACTCAAG
TACTTGATGC AATCGTTGGA AATCGACAAT AGCGATGCTC ATTCCTGGTA CTACTTGGGC
CGTGTCCACA TGATCCGAGG CGATTTCAAT GCTGCTTACG AAGCGTTCCA ACAGGCCGTG
AATCGCGATC TGAGAAACCC CACATTCTGG TGTCTGATTG GTGTTCTCTA TTACCAGATC
TCACAGTATA GGGACGCTCT TGATGCCTAC ACTCGTGCCA TTCGTTTGAA TCCATACATT
TCTGAGGTTT GGTACGATTT GGGAACCTTG TACGAAACAT GCAACAACCA GATCTCAGAC
GCTCTCGATG CCTATAGACA GGCAGAGCGT TTGGATCCAG GCAATCCTCA CATCAAGGCT
AGATTGGATC AACTTATCAA GTACCAACAG GAGGGTAACA CCCATCCTCC ACAACCTCCT
CCAGTTAGCC AACAGCCTAG ATTGCCTCAA GGAATGGTTT TGGAGAGTAG CCAACAGCAG
CAGCAACAAC AACCCCAGCA ATCTCAGCAA CCTGCGCAAC CTTCTTTACA ACCTCAACCT
CAACAACAGC AGCAGCCACA ACAATCCCAA CAATCTCACC AGCCTGCTCC CCCACACTTG
CTAGGTAACC AACCAGGTCT GTTGCCTCCA CCTCCACCAC AACAGGTTCA ACAGATTTCG
CAACCACCTC CACCTGTTCC AGCTCTTCAA CAACTTCCAC CACAACAACA GCAACATCTT
CAAAGAGCTC CCACTCCTCC ACAAGTACAG CCTTTACAGA GACTTCCTGG AAACATAGAA
CAGCCTATTC AACAATTTCC TCCAGTGACG GCGCCACAGC GTCCAGCCAC TGAACTTGCT
CCAGCAAACG GAAAACACGA CTTGGAAGAG AAACTCGACA ATCCTGTCAT CAAAAAATTA
TCTTCAGAAA GAGTTTCTCC AAGACCTGCT CACAACAGCT TGAACTCTCT TATGAACGCA
GCTGCTTCTG TAGAACAAGC CGAGGTAAAA ACGAATGGAG ATATAAAACA GGAAGCTCCA
CATCCTCAAC ATCCAGTAGT TCTGCAAGCT ACTCCAGTTG CTCCTGCACC TCCTGTTGAA
GCTGCACCAG CTGTTGCTTC AGTTGAACCA GTTCAGCCAA AGGCTCCAAC TGTAGCAGCT
GAAAATGCAC CAGCACCACC ACAAGCACCA GTTGCTCCTA TTCAAAACCA AGCAGGGACT
CCAGCTGTGA CTGTTTTGGC ATCTGCTCCT CCTGTGGCAC CCGCACCAGC ACCAGTGCCA
GCATCTGAAC CTTCCCCTGC TAACGGTGCA GCTCCAGAAA ATGCCCCGGT AGCTGTTCCT
CAGTTTTCTT CTAATGTCAC TGGCAAGGAA GAACAAAAGG ATACATCTAG CAATGGCAAC
GAAGAAGAGG AAGTAGAAGA GAAGAAGGAC GAAGTAGTAG AACCTCCAAT GAGAAAAGTT
GAAGAAGACG AAAACTACGA TGACGAATAG CCTGCTTTCA TTGGTTCTGC TTTGTGAAAA
TGTTAGATTC TATATACTTG GGGGAGGTTT TCCACAATGT ATATATGTAC TTTTGAATGC
TCTGTATTAT TTAGCTTAAT TGATATAACT AGTGTAATTG ATATGTAAAT TTTATTCTTC
GACAGCTGGA TATCCTCCTG GTAAGTCAGT TAACTCTGCT GGTAATTCTC CCAAGGCTCC
TGTCAACTCA AGTTCCACCT CTATGTCGGT ATCGTTGTCC TGGTCACGAT ACCAATCACG
AAGCTGTTCA AGATTGAGGT TATCTTCACC TCCTGTGTAG ACAAATGAAT CTTTTCTAAG
GACTCGTATG TCAGACAACT CGATAGCTTT CCTGTGTGCC ATGTAGAGAT TGAACATATC
TTTGACCAAA ACTACTCCTA CCAACCCTAT TATATTGCTC ACAAGCATCA ACTTGGCTGG
AGTGATGGAC TTATCCAGAA ATTGCAAATT CTTGAAAAGG AGCAGGAACA CCACGGCTCC
TACTTTTGAG CTTAGATATG GCCATAAGAC CGTTGTGATC ATACGGATAG TGGACGACTT
GTTAAGTAAT GAATGGGAAA AGTCATTCTT CAAACAGGCA GACACATTGC AATAGCTAAG
AAAGGCTCTG GTTTTGATGT AGTCCTGAAA GTAGTTGAGA TTATAAAGTC TCAGTAATAG
AAGAAAGCTA CGTTTAATAT TCACGTACAA CAAACCAATC AAAGGTACCT TATAGATAGA
GTTGGTACTT TGCTTGACTT CTGCCTTCAA TTCGGAGTCC ACAGTGAGTT GAACATGGCT
GTACAATCCA GACAACTTGG CCAACTGGAA GATAGTGTTT TCCATTCTAT TGATTTCTTC
TTCGTTCATG GAGTTGGCGA TCGTTCTAGG GCGCGAACTC ATGGTGTTGT TCAAATGGGC
T
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| Protein sequence | MLMSLNKPLN GLLHHVHHSP SLTQHELSQQ QQPMLAPPPP GSVAPPPPPP LAAAAAAAAA
ASVGAPNILS ETTAATWLAI GSLAESLGDI DKALASYDSA LRHSPNNPEA LIKLANIYRS
KDVFFKAAEL YEQALNYNPE NGETWGLLGH CYLMLDDLQR AYAAYQRALY YLDNPNVPKL
WHGIGILYDR YGSLEYAEEA FVRVLELDPN FDKANEIYFR LGIIYKHQGK LQLALECFQY
ILNNPPHPLT QPDVWFQIGS VLEQQKDWVG AKDAYEKVLQ VNPQHAKVLQ QLGCLYSQAE
SSPSTPSQNG SGAAQPFQQD LNIALKYLMQ SLEIDNSDAH SWYYLGRVHM IRGDFNAAYE
AFQQAVNRDL RNPTFWCLIG VLYYQISQYR DALDAYTRAI RLNPYISEVW YDLGTLYETC
NNQISDALDA YRQAERLDPG NPHIKARLDQ LIKYQQEGNT HPPQPPPVSQ QPRLPQGMVL
ESSQQQQQQQ PQQSQQPAQP SLQPQPQQQQ QPQQSQQSHQ PAPPHLLGNQ PGLLPPPPPQ
QVQQISQPPP PVPALQQLPP QQQQHLQRAP TPPQVQPLQR LPGNIEQPIQ QFPPVTAPQR
PATELAPANG KHDLEEKLDN PVIKKLSSER VSPRPAHNSL NSLMNAAASV EQAEVKTNGD
IKQEAPHPQH PVVLQATPVA PAPPVEAAPA VASVEPVQPK APTVAAENAP APPQAPVAPI
QNQAGTPAVT VLASAPPVAP APAPVPASEP SPANGAAPEN APVAVPQFSS NVTGKEEQKD
TSSNGNEEEE VEEKKDEVVE PPMRKVEEDE NYDDE
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