| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_66618 |
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| Symbol | |
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| ID | 4851730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 2675602 |
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| End bp | 2679783 |
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| Gene Length | 4182 bp |
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| Protein Length | 1103 aa |
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| Translation table | |
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| GC content | 42% |
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| IMG OID | 640393438 |
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| Product | predicted protein |
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| Protein accession | XP_001387079 |
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| Protein GI | 126275416 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.413972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CGTCCTCCTG AATCTAACTT GGGCCCGACC GATTGCTTAT TTGAGATTCA CAACCTCAAT
TGTATGGTGT AAAATTGTTT GTGGAAGTTA GAAGTGTGCT TCTTCTTTTT TCGGCCTGTT
TTCTCAGCCT CTTTATTTAG TCGTCATTTT ATATATTTCT TTAATTATTC ATTTACTTGT
TCATTTGCTC ATTTGCTCAT TTGCTCATAT CATTTATCCA TTTCTTCACT TTTGCTACCC
AGCAAGTGGT TAGTTACCGG ACCCCCACAT CCATATCCAC ATCAAGACGA CCGAGTCCTA
CATTTCCAGA TTCATATCAC AGGCTGTTGT GCCGAAGCGG AGTCTATCAT AAGATCTAGG
GGTTTTCTCC ACCTTGCTGT CTGCAGCGTA CAGAAGATCC ACCCCCGAAA AATTGACAGG
CAGATTGTGA AGTCACTCCG ACCTGCCGCC TACCTAGATA TATCAGTCTC GGACATTACT
GTCAACCTGT CAGCCGTGCT CCAGCGTCAA TTGCTCTGTC TTTCTTGCAT CTGAAATATA
TATGTCAAAC CCCATCAGTA CTCCGATCCA GAGCCAGAAT TCAGCTGATT CGTCCACCAC
ATCGTCCTCA CGTCGACCGG TGGCGAGAAG AGCTTGCCTT TCATGTCGTG AGAAGAAGAT
CAAATGCGAT GGCGAGCCAA TCAGCACCAT CGTGTCTGTC GACGGCTCCA ATAAGATTAT
CCCCCAGCTG ACGAGAATAT GTTCTAATTG TAAATTTCTC GGTATAGAAT GTGTGTTTGT
CCAGTCCAAC AGAGGTGGAC GACGCCGAAA AAGAGCTTCT ATCTCCCATG ATATCGACGA
CCACGCCGAC GAATCGTATA TAGAGGGCCC CGACCACAGT AAAAAATTCC AACCTGATTC
GACCAACTCT AGCTCTACAA TTTCAAGTTC CGCACCCGAC TTTCCGTACC ATATTCGCAG
TGGTAGCGAG TCGGTCAATT ATTCCGCACT GAGCCCTAGG CCCACCGGCC ACGAGCCGAC
ACTGAAAAAT TCCACAGACA GACTCAGTTC GTTCATACTA GACCAGCAAC GAACCTCTCT
GATGCTGTCA TCACAGTTCA GACCAGTGTC ACCAGCATTT TCTTCGGTAT CGACACTTGA
GAGACCGCCC ATGTATTTTT CACGTACAGA GCTGAACTCA GACTCTGCCT CTATTTCTAC
TGCGACTTCT GGTGCCAATG CTGCCTACCA TGAAGACTAC GCCAGACATT ATAACCCTTA
CGGGCCTCCA CCACCTCATC AAGGCTATCC ACATCCACCA CCTCCACATG TCCCCCACGG
ACCTCACAAC CAACAGGGTC CCCATGACCA TCAAGGGCCT CACGGTCACC ACGGTCCTCC
CCATCACCGA CATGGTCATT TCCACCATAG AGGTCCTGGT CGCGGCGGCA GAAGAGATTG
GTTTGATCAC TACGGGCCTC CACCTCCCCC ACACCAGGGT ATGGGCTATG GACCTCCTCC
ATGGGCTAGA AGACCATGGG ATGCCTGGGG CCCTCCTCCA CCGGGCCCAC CACCTCCTCC
ACCGCATTAT TCCGAAAGCC AACTCCCTAA TAGAGAAGTT TACGAGTCCG CTCCAGCCGC
ACCAGTACAA GCACCTCCAG CACCTCCAGC ACCTCCAGCA CCTCCAGCAC CTTCAGCACC
AGCAAGTATA TCGTCTATTT CTAATCAGTC TGCCATTGCT GCTACTACAG CTCAAGAAAC
AGAGTCCTCC ACTACCCAAA CTAAGTTGTC TGAAACACCT GTATCTACTA CTCACTCGGT
TCCAGTTATA TCAGCTAACC TTACCAAAAG TACTTCTGAG TCGTCGCTAA TCGAGGGATC
CGGAAAACCT CGTCTTCCTC CTATCGATGG TATACCTGTC AAGCCACCCA AGTCGGCGAA
CTCCGAGCAT GGTTTCGCCG AAACCGACAA AATGTCACAA ATAGTGTTGC CGGGTATTTT
GGGTACACAA TCGATTTCCA TGGTCGGCGG TGTCTCGCTG ACTTCGAATT ATAGCCTTTC
GAAATCTTCC ACGACGACGT TGGAGTCGGC AAAAATTGAG AATGACTCCA ATAGATCGAT
TTCTTCTGAA CAAAAACCGA GATTGCTAAA TTTACCTAGT TCTATCTACG AACAGGATAA
GTCGACGACA GTGTCCTCTG TACCTCCATT TTCAGATTAT GAATTGAAGC ATTACAATCT
ACCTCCGTGG GATATTTTGG CCCAAATATT GGATCTATAC TACGCTTTCC AACATCCAAA
TCATAGACTT TTAGTGCCGA AGAAATTACT ACTTTCCAAA TTATCTCTAG GATACTCGAG
CTCAATTTTG CATGCGTTGA TCGCTTCAAC TTGTCCTTTG TTGCTGGTCT TCAATGTTGA
TGTTCCTAAG TCTTGCGATG AGAATTATTG GATCGAAAAA GTTTTCCAAT ACTGGGACGA
CCTCAATGAT TTCGGTATTA TCTTAACCTA CAGTTTACTT TCCAAAACAT CGTCATATCG
TTTCCGTTTG TCAAAACTTA ATGAATTTAA TATCAAAATA TGGGAAGCTA TTTACAACAA
CAATTACGTG GAAATTTACA ACAGCACTAA ATTCGAGTTG GAAAACAGGG ATAAAAGCAA
AACGTATACC TCGAGACAAA TATTCGAACG AGAGCTGATC ATTAATTTAA TATGGAATTT
TTATGTGAAC GACCTCATAC TATTGAGGTT TAATTTGGGA AATCCGTATT TCAAATTATC
CACCAGGCTC CAGGATTTTA AATTTAATTA TGAATTAGAC ATCTACCTGA AGAAGTTGCT
TTTGCCGTTG GAACTCAACC TGGGATCTTC AAGATCTAAT TGGACAGAGT TGAATGATTC
TACATTGACT CCATCAGGTT CCAATTCTGT TATCATTTCA GCAAAGATTC TTGAAGGTGT
CATGACAAAA ATATCTAACG AAGAACTTAC GAATGACGAC TTACTTGATA ACACCCCTTT
CAATCGTTCA TTCATTAAAA ACATTTCTAA CAAATTTGTA ACCATCGATC ACACCAGAAA
ATTGTTGATT ATTGATACTG GATATTTATT ATCCAATTTT ATTTTCAAGA CAGCCGAGAT
ATTACAGAGA TTTTATTTGC TAGATGATAT CCTTATTTTT AAGTTGGCGA AACTGATAAA
TTACACTGGT CGATCTGGAT CTGATTTTAT TCCTTTGATA TGCGAAGTAG ACGTCAGTGA
CATTGCCAAA TTTGAAAATG AAGGAAATGG CCCTAGGATT CTCGAGTCAA TCACAGAAGA
AAAGTGGACC ATGATATTCT CTTTGATTCA AACTACATTG AATTTCATCA GGATGGTAGA
GCTTATTGAT CACGAAAAGA GCGACCAGGA ATTGGACTCA TATTTGGTGG CTGTCGGGCC
CACAGAAGAA GGTGAATCGG GCTCTGGTCA AATTTGGTTC GAGAACTCAC ATTTGCAAAC
TACTATAAAA GAAGCATGGC TCAAGTTCCC TGACTTCACT CTTGTTGCAG CATGTACTGT
ATTATCTGTT ATTTGCAATT TGGTCATGCT TACCAAGTAC ATCAAAGTTC AAAAGCCTCC
GGCAAATGGA GATAGTTCTG CCTCCATTAG AATCATATTT CTTGAATCGA GCTTGGAGAA
AAATTTTAGC ATTCCAGTTG ACGACGAAGA AATAATAGAA TTTAATTACG AAAATTTGCT
AAAGAGATTG TCGACATTGG TTGAGTTCAT TAAAACCAAA TCGCAAATCA CAAACGAATC
TGTTGTGACT AGCACAATTG TTAAAATCAA CAAGATCAGC CATTATCTCG AGGGCATTGC
TACGAATCAA TAAATTTAGA AGATAGGAGA ACTGACGTGA AAATGACACA ATGGACCCTG
AAAACGGGGT TCAAGATTTC TTTTTAAGGT AATATCGCTA TCAAAAAGCA AGGGCATTAT
TAAAAGGGAC CTTCATTTGG TCATGAGGTT CCGGTTACAT TTTCAAGACC AAGATCAAAT
TTCATCAGCA TCATTGCTCA TTTTATGACA AATTCACTTC TTCAACCTTG GAGGTTTAAT
TTCAATTGTA TTTTGCATTC ATACGAATTG TATAATTAGT ACTGTACTAC CAATTGCATA
TAGACTCTTT TTTCGTTTTG TTATATTATT AATTTCGGTG TA
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| Protein sequence | MSNPISTPIQ SQNSADSSTT SSSRRPVARR ACLSCREKKI KCDGEPISTI VSVDGSNKII
PQLTRICSNC KFLGIECVFV QSNRGGRRRK RASISHDIDD HADESYIEGP DHSKKFQPDS
TNSSSTISSS APDFPYHIRS GSESVNYSAL SPRPTGHEPT LKNSTDRLSS FILDQQRTSL
MLSSQFRPVS PAFSSVSTLE RPPMYFSRTE LNSDSASIST ATSGANAAYH EDYARHYNPY
GPPPPHQGYP HPPPPHVPHG PHNQQGPHDH QGPHGHHGPP HHRHGHFHHR GPGRGGRRDW
FDHYGPPPPP HQGMGYGPPP WARRPWDAWG PPPPGPPPPP PHYSESQLPN REVYESAPAA
PVQAPPAPPA PPAPPAPSAP ASISSISNQS AIAATTAQET ESSTTQTKLS ETPVSTTHSV
PVISANLTKS TSESSLIEGS GKPRLPPIDG IPVKPPKSAN SEHGFAETDK MSQIVLPGIL
GTQSISMVGG VSLTSNYSLS KSSTTTLESA KIENDSNRSI SSEQKPRLLN LPSSIYEQDK
STTVSSVPPF SDYELKHYNL PPWDILAQIL DLYYAFQHPN HRLLVPKKLL LSKLSLGYSS
SILHALIAST CPLLLVFNVD VPKSCDENYW IEKVFQYWDD LNDFGIILTY SLLSKTSSYR
FRLSKLNEFN IKIWEAIYNN NYVEIYNSTK FELENRDKSK TYTSRQIFER ELIINLIWNF
YVNDLILLRF NLGNPYFKLS TRLQDFKFNY ELDIYLKKLL LPLELNLGSS RSNWTELNDS
TLTPSGSNSV IISAKILEGV MTKISNEELT NDDLLDNTPF NRSFIKNISN KFVTIDHTRK
LLIIDTGYLL SNFIFKTAEI LQRFYLLDDI LIFKLAKLIN YTGRSGSDFI PLICEVDVSD
IAKFENEGNG PRILESITEE KWTMIFSLIQ TTLNFIRMVE LIDHEKSDQE LDSYLVAVGP
TEEGESGSGQ IWFENSHLQT TIKEAWLKFP DFTLVAACTV LSVICNLVML TKYIKVQKPP
ANGDSSASIR IIFLESSLEK NFSIPVDDEE IIEFNYENLL KRLSTLVEFI KTKSQITNES
VVTSTIVKIN KISHYLEGIA TNQ
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