Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_66613 |
Symbol | |
ID | 4851724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 2663854 |
End bp | 2666267 |
Gene Length | 2414 bp |
Protein Length | 485 aa |
Translation table | |
GC content | 46% |
IMG OID | 640393432 |
Product | predicted protein |
Protein accession | XP_001387076 |
Protein GI | 126275400 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | CTCGGAATAA TATTCACCTA TTTCCAATTA TTACTTCCAT TACAGAGCAA CTATCGCAAT CGCATTAGCT GTCCGTAAGC TTTTCGTAAG AACACCCAGT CCTCCGCCCT CTAGCGTTCC CAGCCCCTCA ATCTGCCGTG CTGGCGATTT TCGCTTCGTT CTACTACAAA AGTGTCATCT CTGGCCCACT GGACTTTTAC TTTCCTTTCA GACTCTACCA GTGCCCTTAC CCCCGTCATT GACGACATCT GCTTAAAATT CCATCACTGT AGACACCTGT GCCCACTACA GCCTTAGCCG AGCCGCTGCA GTTTCATGAT CCACCTCGCT TGCACTAGCG TTTCATCCAC TGCCATCTAG CCCTACGTGT GTTCAGTTTG TCTCAGCTCA CCGTCAGCAT CAATTCCGTG TCAAATCAGC TTCAAACCAG CTTTACACCA GTGTCTGTAA CAAAGCCTTT CTTTTCGAGT CCATATATCC GATAGCTATA AGTAGCCCAT ACAAGCCATA GACATTTCCA TGCCAACACC GGTGTCTGTA TCTGTCTGAG CCTTTCATCA GTTAGTTACA CATTTTCACA CTCAGAGTTA CTATCGCCCC TATCCTTTTC ATTCTACATT GTCTTCTTTA TCGTGCCACA TCTCAGTCAT CTGTGTAAAA AAAACACTCT GTGATTCATC TGTGATTCAC TTACATATCT CCCGATTCTT CGCCAGCATC CTGCCATCGC GATATAGCCA CTAGTTTCAT CACTAGTACT CCACATCAGT ATTGTCACAG CTTCAGCCTT CCTTGTTGGT CCCATCCGAT CACATCTCTA ATCTCGGCAC AGACTCCCTC GATGTCTTCG CAATGCACAA ACCCACCAAC AAACGAAGCA ACTTCCAGTT CACATACGAT GCCGACAACT ACCTACTCGA TCTCGTGTTT AACTATAGGG AAGACATATT CACCCGCGGA AACACCATCC GAACCTGGGA ACAGGTGCTA CTCAAATTTA ACCAACGGTT TCAGACAAAT ATCGTGCAAA GCCGGACCAT CAATAACCGA TTTAAAATTC TCCGTAAAAA CCTTGAGAAT AAATTGCTCA GCGAACAGCA TCCAATAACC GAGCTAAACC TTAATGAAAA CGAAAAATTG CTAGTCAGTC TAAATGAGTA TATAAGTCGA CGTAAACGAT ATTCACTTCC TCTGGATTCG GATTCTGGAA GCGTTCTGAA AAAGCAGAAA AAGATGCCGG AAAACGATTC CCAGAATCTT GTGGATGAAA GACCTGACAG CGCATTTGCC TCTCCGACCA ACACGACTAT GCACTCAGAG ATTACTTCAA TGTCACCTAA GATGTCCTCT ACGTTGTCCA CAACGGCGAC AGGAAAGTCT ACAGATTTCA TACTGTCTGG CACACCAAAG TTCACCGAGG CAGGCCCTCG GGTCCTTTTC TCGAATCCAG ACCCTCATGG CCACATACAA GAAGTCCAGC AAGCAGTAAT GTCTGGACCT GGTCAAGTAA CGGGTCCCTT AGCCTCCGTG GCCCTGTATA CTATGAGCAC TCCTCAGTTG CAACCGGGAT TACCAGACCT GAGTCTAATA GTATCACCAC ACTCTCTGGT AATGATGGCT CAACAGGCAA CACAACCGGC TCCCCAGCAA ACAGGACAGC AACCAGGACA GCAGCAGCAA CGACAACCCC AGCAACAGCC TGGTGCTATG CAACGTCTGC TTTCTTCTTC GCGAATACTG TCCTCTTCCA CCATCCAGTT CCCCGTTGCT TCTCCTCTCT CCGTACAATA TCTAGGCGTG CGATCCATAG AAAGCCTCAC TGGAGCTTCT GAAGATCGAA AACAGCAACA GCAACAACAG CAGCAACAGC AGCAACAGCA ACAACAATCT AGCATGATTG AGCCTGGACC TCGGAAAAGG ATAAGGAGTT ACCCGAAGTC GTTGAGTCAG CTCGCAAATA ACCAAGAGTT ACTAGAGCAG TATCTAATAG CGCAGAATGA ACACAACTTG CAGATCAACG AGCTTCGAAG AGAGTTACGG GACTTCAAGG ACGAGGTCAA CTTCAAAATG AAAAACTTGC TAACTGCAAT CGAGCACCAA TCCACCTCAG TGTCCATCAA GATGAACAAC TTGTTTGAAC TCATGATGAC CAGAAAGGAG AACGACGTCA AGCTCGATCG CATAGCTAAG GCACTAGAAC TTGATGCCAT GTCAGAATTC ACTCAGCAAC CACAGGCAGA ACAACCACAG GGTCCCCTTC AACACTCTGA ACATCACCAA CGGACAGAAT ACGATGACGA TACAGAATGA ACTGCTGGTG TGCAGAGTTT CCAAAAGTTA ATTTAGTTCA TCAATGTAGT AATACTAATA GCTTATATAC TCGAGTTGTA GAACAAAAAG ATAGAAATTA TGTC
|
Protein sequence | MHKPTNKRSN FQFTYDADNY LLDLVFNYRE DIFTRGNTIR TWEQVLLKFN QRFQTNIVQS RTINNRFKIL RKNLENKLLS EQHPITELNL NENEKLLVSL NEYISRRKRY SLPLDSDSGS VLKKQKKMPE NDSQNLVDER PDSAFASPTN TTMHSEITSM SPKMSSTLST TATGKSTDFI LSGTPKFTEA GPRVLFSNPD PHGHIQEVQQ AVMSGPGQVT GPLASVALYT MSTPQLQPGL PDLSLIVSPH SLVMMAQQAT QPAPQQTGQQ PGQQQQRQPQ QQPGAMQRLL SSSRILSSST IQFPVASPLS VQYLGVRSIE SLTGASEDRK QQQQQQQQQQ QQQQQSSMIE PGPRKRIRSY PKSLSQLANN QELLEQYLIA QNEHNLQINE LRRELRDFKD EVNFKMKNLL TAIEHQSTSV SIKMNNLFEL MMTRKENDVK LDRIAKALEL DAMSEFTQQP QAEQPQGPLQ HSEHHQRTEY DDDTE
|
| |