Gene PICST_66613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_66613 
Symbol 
ID4851724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp2663854 
End bp2666267 
Gene Length2414 bp 
Protein Length485 aa 
Translation table 
GC content46% 
IMG OID640393432 
Productpredicted protein 
Protein accessionXP_001387076 
Protein GI126275400 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTCGGAATAA TATTCACCTA TTTCCAATTA TTACTTCCAT TACAGAGCAA CTATCGCAAT 
CGCATTAGCT GTCCGTAAGC TTTTCGTAAG AACACCCAGT CCTCCGCCCT CTAGCGTTCC
CAGCCCCTCA ATCTGCCGTG CTGGCGATTT TCGCTTCGTT CTACTACAAA AGTGTCATCT
CTGGCCCACT GGACTTTTAC TTTCCTTTCA GACTCTACCA GTGCCCTTAC CCCCGTCATT
GACGACATCT GCTTAAAATT CCATCACTGT AGACACCTGT GCCCACTACA GCCTTAGCCG
AGCCGCTGCA GTTTCATGAT CCACCTCGCT TGCACTAGCG TTTCATCCAC TGCCATCTAG
CCCTACGTGT GTTCAGTTTG TCTCAGCTCA CCGTCAGCAT CAATTCCGTG TCAAATCAGC
TTCAAACCAG CTTTACACCA GTGTCTGTAA CAAAGCCTTT CTTTTCGAGT CCATATATCC
GATAGCTATA AGTAGCCCAT ACAAGCCATA GACATTTCCA TGCCAACACC GGTGTCTGTA
TCTGTCTGAG CCTTTCATCA GTTAGTTACA CATTTTCACA CTCAGAGTTA CTATCGCCCC
TATCCTTTTC ATTCTACATT GTCTTCTTTA TCGTGCCACA TCTCAGTCAT CTGTGTAAAA
AAAACACTCT GTGATTCATC TGTGATTCAC TTACATATCT CCCGATTCTT CGCCAGCATC
CTGCCATCGC GATATAGCCA CTAGTTTCAT CACTAGTACT CCACATCAGT ATTGTCACAG
CTTCAGCCTT CCTTGTTGGT CCCATCCGAT CACATCTCTA ATCTCGGCAC AGACTCCCTC
GATGTCTTCG CAATGCACAA ACCCACCAAC AAACGAAGCA ACTTCCAGTT CACATACGAT
GCCGACAACT ACCTACTCGA TCTCGTGTTT AACTATAGGG AAGACATATT CACCCGCGGA
AACACCATCC GAACCTGGGA ACAGGTGCTA CTCAAATTTA ACCAACGGTT TCAGACAAAT
ATCGTGCAAA GCCGGACCAT CAATAACCGA TTTAAAATTC TCCGTAAAAA CCTTGAGAAT
AAATTGCTCA GCGAACAGCA TCCAATAACC GAGCTAAACC TTAATGAAAA CGAAAAATTG
CTAGTCAGTC TAAATGAGTA TATAAGTCGA CGTAAACGAT ATTCACTTCC TCTGGATTCG
GATTCTGGAA GCGTTCTGAA AAAGCAGAAA AAGATGCCGG AAAACGATTC CCAGAATCTT
GTGGATGAAA GACCTGACAG CGCATTTGCC TCTCCGACCA ACACGACTAT GCACTCAGAG
ATTACTTCAA TGTCACCTAA GATGTCCTCT ACGTTGTCCA CAACGGCGAC AGGAAAGTCT
ACAGATTTCA TACTGTCTGG CACACCAAAG TTCACCGAGG CAGGCCCTCG GGTCCTTTTC
TCGAATCCAG ACCCTCATGG CCACATACAA GAAGTCCAGC AAGCAGTAAT GTCTGGACCT
GGTCAAGTAA CGGGTCCCTT AGCCTCCGTG GCCCTGTATA CTATGAGCAC TCCTCAGTTG
CAACCGGGAT TACCAGACCT GAGTCTAATA GTATCACCAC ACTCTCTGGT AATGATGGCT
CAACAGGCAA CACAACCGGC TCCCCAGCAA ACAGGACAGC AACCAGGACA GCAGCAGCAA
CGACAACCCC AGCAACAGCC TGGTGCTATG CAACGTCTGC TTTCTTCTTC GCGAATACTG
TCCTCTTCCA CCATCCAGTT CCCCGTTGCT TCTCCTCTCT CCGTACAATA TCTAGGCGTG
CGATCCATAG AAAGCCTCAC TGGAGCTTCT GAAGATCGAA AACAGCAACA GCAACAACAG
CAGCAACAGC AGCAACAGCA ACAACAATCT AGCATGATTG AGCCTGGACC TCGGAAAAGG
ATAAGGAGTT ACCCGAAGTC GTTGAGTCAG CTCGCAAATA ACCAAGAGTT ACTAGAGCAG
TATCTAATAG CGCAGAATGA ACACAACTTG CAGATCAACG AGCTTCGAAG AGAGTTACGG
GACTTCAAGG ACGAGGTCAA CTTCAAAATG AAAAACTTGC TAACTGCAAT CGAGCACCAA
TCCACCTCAG TGTCCATCAA GATGAACAAC TTGTTTGAAC TCATGATGAC CAGAAAGGAG
AACGACGTCA AGCTCGATCG CATAGCTAAG GCACTAGAAC TTGATGCCAT GTCAGAATTC
ACTCAGCAAC CACAGGCAGA ACAACCACAG GGTCCCCTTC AACACTCTGA ACATCACCAA
CGGACAGAAT ACGATGACGA TACAGAATGA ACTGCTGGTG TGCAGAGTTT CCAAAAGTTA
ATTTAGTTCA TCAATGTAGT AATACTAATA GCTTATATAC TCGAGTTGTA GAACAAAAAG
ATAGAAATTA TGTC
 
Protein sequence
MHKPTNKRSN FQFTYDADNY LLDLVFNYRE DIFTRGNTIR TWEQVLLKFN QRFQTNIVQS 
RTINNRFKIL RKNLENKLLS EQHPITELNL NENEKLLVSL NEYISRRKRY SLPLDSDSGS
VLKKQKKMPE NDSQNLVDER PDSAFASPTN TTMHSEITSM SPKMSSTLST TATGKSTDFI
LSGTPKFTEA GPRVLFSNPD PHGHIQEVQQ AVMSGPGQVT GPLASVALYT MSTPQLQPGL
PDLSLIVSPH SLVMMAQQAT QPAPQQTGQQ PGQQQQRQPQ QQPGAMQRLL SSSRILSSST
IQFPVASPLS VQYLGVRSIE SLTGASEDRK QQQQQQQQQQ QQQQQSSMIE PGPRKRIRSY
PKSLSQLANN QELLEQYLIA QNEHNLQINE LRRELRDFKD EVNFKMKNLL TAIEHQSTSV
SIKMNNLFEL MMTRKENDVK LDRIAKALEL DAMSEFTQQP QAEQPQGPLQ HSEHHQRTEY
DDDTE