Gene PICST_66527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_66527 
Symbol 
ID4851492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp1973371 
End bp1974209 
Gene Length839 bp 
Protein Length268 aa 
Translation table 
GC content40% 
IMG OID640393200 
Productpredicted protein 
Protein accessionXP_001388005 
Protein GI126274635 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.565055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ACAATACCTA AAGATGTCGG AAAAAATAGT TTTCTATGGC AAAGAACAAT TGCAAAGAAT 
CAGAATCTTC AACTACTCGG AATCCAATGA TAAAACCTTG ATCGTGCTTC ATGGTGGGGG
CTGGAGAGAC CCTAGAAATT CCTACAATGA CTTCGAAGAC ATGGCCAATT ATATACTTGA
AGAGAAGAAG GCAACAAACA TCAATATAAT AGGTATAGAC TATCGTTTAT CGCCTTTCAT
CAAGCATCCA GTTCATTTAA TAGACGTTCT AACTGCATTC AGGTATATTC TTGAGAACTA
CAAAACTGGA CAATTGCTGA TAGTGGGCCA TTCCGTAGGA GCTACTTTGT TGTTGGAGAT
TCTTAACTAT GTTGAAATCA TCCAGACAGG GTTGGAACAA TTGGAGACGA GCGAGCCGCT
GATCGAGGAA TTGCAGACGT TGTTTGATTT CATCCTGAAA AACTTGACGT TCAAGACTAT
GTACTTTCTT GATGGGATCT ACGATGTAAG GGCATTGCTC GAAGAGTACC CCAGCTACGA
CTTTTTTGTC AAATCAGCAT TTGTTTCAAC AGTAGCAATC GAGGAAGCAT CGCAGTTGTC
TTGGAAGCAG CATAACGAGG CTTTCAAGAT TGCTGTGGAC AAATACGAGA TATTACACTC
ACTTGAAGAC GAGCTTTTAA GCTTAAACCA GCCAAAATTG TTCGCCAAAT ACTTACAAGA
CAGAAAGATC GAATGCAGTT TTAGGACGGG CAATTGGGGT GAACACGAGC AGGTGTATAG
AAGCCAGGCA GTATCAGAGC ATGTGTTACA GAATATGTAG AGGACAATTT AGTAGAAAT
 
Protein sequence
MSEKIVFYGK EQLQRIRIFN YSESNDKTLI VLHGGGWRDP RNSYNDFEDM ANYILEEKKA 
TNINIIGIDY RLSPFIKHPV HLIDVLTAFR YILENYKTGQ LLIVGHSVGA TLLLEILNYV
EIIQTGLEQL ETSEPLIEEL QTLFDFILKN LTFKTMYFLD GIYDVRALLE EYPSYDFFVK
SAFVSTVAIE EASQLSWKQH NEAFKIAVDK YEILHSLEDE LLSLNQPKLF AKYLQDRKIE
CSFRTGNWGE HEQVYRSQAV SEHVLQNM