| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_66436 |
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| Symbol | NIP1 |
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| ID | 4851313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 1473225 |
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| End bp | 1475960 |
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| Gene Length | 2736 bp |
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| Protein Length | 839 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 640393021 |
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| Product | Protein required for nuclear import with some similarity to Nsr1p, another protein involved in nuclear transport |
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| Protein accession | XP_001387924 |
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| Protein GI | 126274335 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CGACATCTAC ACAACGTGAA ACAGCACAAC AGTGATATAT ACAAGATGTC TCGTTTCTTT
GTTGCCGGCT ACAACTCGGA CTCGTCGTCT GAGGAAGAGG ACTTGTTGAG TTCTGATGAA
GAATTGCTTT CTTCCTCCTC TGAAGGAGAA CAGGAAACGT CAGACGATGA CAGCTTAGAT
TTCGATGACC AGTCTGATTC TGACTCAAGT GACTCTGACT CCGATGGCCG TCCAAGTGGT
CCAGCATATT TCTTGAAGAA GGACTTCATG AAAGGTGGTG CTGGCGGAGA CTCTGACTCT
GACTCTGAGG ATGAAGGCAG AAGAGTAGTG AAGTCTGCCA AGGACAAGTT GCTTGACGAC
ATGAACGAAT CCATTGAAGC CATTAACGTA GCCAGAAGAT CCGACACTTG GACCACCGTT
GTATCGGAAT TTGACAAGTT GGGACGTCTC TTGGTTAGAG CTGGTCAGCA AAGCGTGTCT
ACGCCTAATG CCTACATCAG ATGTTTGGCC GATTTGGAAG ACTACATCAC TGCTACTAGT
GAAAACGAGA AAACCGAAAA GTCTTTAAAC GCAGCCGAAG CCAGAGCATT TAACATGGCT
AAACAGAGAG TCAGAAAGCA AATCAAAGAG TACCAGGCCC AATATGACCT CTACAGAGAG
AACCCAGAAT TGTTTGAAAG GGAAGAATCC GTAGACATCG CTGCTCCTTC CAGATCTGAT
GTTCCAGTAG AAGATACTAC GGGCAGAGTC TTGAGTCCTG TGTTCACCAT CTTGAAACAG
ATCGCTGAGA CTCGTGGTAA GAAGAACATC GACAAGTACG AACAGATCAA AACCTTGGAA
GACTTGTTGA ACGACAATTT GGCAAAGGGC TCTGTTTTCG AGTTGATTTC CATCTATCAG
ATGTTGTTGT CGATCCGTTT CGACGCTTCG GCCAACCAGA ACTTCATGCC TATTGAACAA
TGGAAGAACA ACGAGGCAGA CCTCACCTCT TTGATCGGAC TTTTGGAATC CAACAAGGAC
ACCTACCAGT TGTCTGAGCT TGGTTCTACT ACTGATGATA TCGACATCGA ACCTGTAGCC
AATGAATCTG GTGTCAAGGC TATCTTTGGC TCCATAACTT CGTTGATCGA CAGATTGGAC
GATGAATTCA CCAGATCCTT GCAGAACACC GATCCTCACT CGATTGAGTA CGTGCAAAGA
TTAAAGGATG AAACCACCAT CTACCAGTTG ATCGTGAGGG GCCAGTCTTA TATTGAGTCT
ATAACGCCAG CTGAAGTCCA GCAGTCGGTT GAGCAGTTGT CGAGAGTCGT TCTCCGTAGA
TTGGAACATA TCTACTACAA GCCTGACCAG TTGATCAAAG CTAACGAGGC TGAAGCCTGG
AAGGGTATTT CTCACGAGTC TGTCATTGTA TCCAAGGACT CCACTCCTGC TGAGTTGATT
GAAGGATTGT CGTCGTTCTT AACCAAGCAC AAGAATCCAG TCTACGCCAA ACACGCTTTG
TTGTTCTCGG TCTACTACTA CGCCGTCAAC AACAACTACA ACAGAGCCAA GGAGTTGTTC
TTGGACTCGC AAATCTTCAA CAAAATCCAC CATGCTGACT CCAGCTTGCA AGTCCAGTAC
AACAGAGCCA TTGTTCAGTT GGGTTTGAGT GCATTCAGAA ACGGAGCTGT CGAAGAATCT
CACAAGGTAT TGAACGAAAT CGTCAACTCG CAAAGATCAA AGGAATTGTT GGGCCAAGGG
TTCAACTCTA AATATCCCAA CCAAGCTACA ACCGTGGAAA AGGCTAAGTT GTTGCCTTTC
CACCAACACA TAAATTTGGA ATTGCTTGAG TGTGTTTACC TGACCTGCTC GTTATTGATT
GAAATTCCAG CCTTGGCTGC AGCTACAAAC TCCAAGGACT CCAGACGTAA GGCAACCACC
AAGTCATTCA AGAGTAAGTT AGAATTCCAC GACAGACAGT TCTTCACTGG TCCTCCAGAG
AGTATCAAAG ATCACATAGT GCATGCCTCC ATAGCTTTAC TGAAGGGTGA TTGGGCTAAG
GCTTACCAGT TGTTGTCGTC TATCAAGATC TGGAAGTTGT TCCCTGATAA CGATGACTTG
TTGGCCATGA TGAAGAACCA GTTACAAGTC GAAGGTTTAA GAACATACAT TTTCTCCTAC
AAGTCGATTT TCTCTAAGTT ATCTTTAGGC AAGTTGTCGC AGATCTTCGA GCTTGAAGCT
GACAAAGTTG AGTCCATTGT TCAAAAGATG ATAGAGACAA ATGAGATTGG CGGAACATTA
GACGAATCCA AGGCATTTAT CCAATTCGCC AGTACCGAGC CACAAAGATC CAGATTGCAA
GAGTTAGCTA TTGTTATGAA CGAAAAGGTT GGTTTGTTGA CCGAAAAGAA TGAAAAGACT
TCGTCCAACG GTTACGGTAA GAAGCAGCCT CAACAACAGC AACAACAGCA ACAACAGCAA
CAGCAACAGC AGCAACAGCA GAAGGATTTG CTCCAAGAGG ACAACAGCAG ATTCAGATAC
GCCAACGTTA ACACTAACAA CGATGAATTC CAAACTACTG CCTAAGCTGA GCTGGCTGTT
CCAGTCACGT TTTGTACAAT AATCTCTTTA GCATGGATCT CTATTTGCAT CTAGACCAGA
TAGACTCTGT CTTCCTGAAC TTATCAAGGC TGATTTGTTC CTGAGTCCCT GACTCGATAT
ATATATTAGT TCTTTTTAAT ATAACGTTCT ACGTGA
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| Protein sequence | MSRFFVAGYN SDSSSEEEDL LSSDEELLSS SSEGEQETSD DDSLDFDDQS DSDSSDSDSD
GRPSGPAYFL KKDFMKGGAG GDSDSDSEDE GRRVVKSAKD KLLDDMNESI EAINVARRSD
TWTTVVSEFD KLGRLLVRAG QQSVSTPNAY IRCLADLEDY ITATSENEKT EKSLNAAEAR
AFNMAKQRVR KQIKEYQAQY DLYRENPELF EREESVDIAA PSRSDVPVED TTGRVLSPVF
TILKQIAETR GKKNIDKYEQ IKTLEDLLND NLAKGSVFEL ISIYQMLLSI RFDASANQNF
MPIEQWKNNE ADLTSLIGLL ESNKDTYQLS ELGSTTDDID IEPVANESGV KAIFGSITSL
IDRLDDEFTR SLQNTDPHSI EYVQRLKDET TIYQLIVRGQ SYIESITPAE VQQSVEQLSR
VVLRRLEHIY YKPDQLIKAN EAEAWKGISH ESVIVSKDST PAELIEGLSS FLTKHKNPVY
AKHALLFSVY YYAVNNNYNR AKELFLDSQI FNKIHHADSS LQVQYNRAIV QLGLSAFRNG
AVEESHKVLN EIVNSQRSKE LLGQGFNSKY PNQATTVEKA KLLPFHQHIN LELLECVYLT
CSLLIEIPAL AAATNSKDSR RKATTKSFKS KLEFHDRQFF TGPPESIKDH IVHASIALLK
GDWAKAYQLL SSIKIWKLFP DNDDLLAMMK NQLQVEGLRT YIFSYKSIFS KLSLGKLSQI
FELEADKVES IVQKMIETNE IGGTLDESKA FIQFASTEPQ RSRLQELAIV MNEKVGLLTE
KNEKTSSNGY GKKQPQQQQQ QQQQQQQQQQ QQKDLLQEDN SRFRYANVNT NNDEFQTTA
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