Gene PICST_66419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_66419 
SymbolNBE1 
ID4851265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp1344695 
End bp1346623 
Gene Length1929 bp 
Protein Length642 aa 
Translation table 
GC content42% 
IMG OID640392973 
ProductKinase A-anchor protein Neurobeachin and related BEACH and WD40 repeat protein 
Protein accessionXP_001387486 
Protein GI126274251 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.254101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.342317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGAG TAGGATCAAT AAGTCATCTG GAGGGACCTT TGGGGGCTCC GTATGGTGAA 
AGGGCTTCAA ATAGAGCCTT AAACGAGTCA GAAGCACAAG ATATTGACCG AAATGTGAAC
GACATTGTCG CAAGGACTTA TCTAATGAAC CTCGGTGGTG AATCCACAGA TGCCGCTGAA
AAGGGCGTTT TCGAACCATC CTTCGAGATC CCAGTGTCAA CTATAATTGC AGAGCCGGCC
CAAATACGAC ACAATCACAT TGGTGGCCTG GTTGTTCGGA ACCAACCCCA TTTAAGCTCT
ACTATGGACA GCCGTGAAAC TTCAATTACG AAAGATTTCC ACAGTCACGT GCATGGCCAA
ATACAGGACA TAAAAATTGC TGCAAATAAT GATAACGACA TGAATCCTAC TTCTTTTGAG
TCTTCCAACA GCTCAGCTAT TTTACCAGAA CAAGAGGTTT CCCTTCATGT TTCCAAATTG
CAAGAAAAAT CAAAAACCCA AAAACCCAAA AACGTAGAAA ACTTACAAAA TCCTCAGAAA
ACTAAAAAAG CGTTACAAAA TGCTAAAAAC AATTCGAAAA ACTCAAATAA TACAAAAGCA
TTTAACCAAG TCATTGACGA GCAAGAATTT CCCCCTCTAG AGACTTCCAG CAAATCTTCC
AAACCAAGGC CACGTACCAC GGACACTACC AAATACACCT CAGCCCCAAT ACCTAGACCA
AATAATGGTC CATCTGCGAG CCAGCTTCAA AACGGTGTTG ATAGAAACAC TTCAGCTATT
TTACAAGCAG CAACTACTAG ACATGAACAA CTACACCAAA TATTACATTC TACCGGGCAA
CTTACACAAG AACAGGACGA TGAATTGGAT AACATTTACT ATGTACATGA ATTTGCAGAC
TATCTCACGG ATATTTTTTG GGCCAGCCTA GAAGAAAGAC TTAAAGCATG GAATGTCCCA
AAAAGCTTCT GTCTTACCGC TCTCGGTACA ATTAGTCGGA TCGTTGCAGA GAGGGATTTG
GTACGTATCC GCATTGACGG TTTCTATAAA AAAGACGGTC ATTTCGACCA AAGGCACTCA
ATGCCAATTA AAGAAAAAGC CAAAATTATT GAGACGCATC TTATGGAGAC CCTCCCCAAC
AGATGGTCTG CAATCTCCCA GGCCCTAAAT GAACTCCGTA TATCCATGAA TTTCATAAAG
AGCCAACACA GGCCGGGCTC AAAAGAAGAA TACGAAGCCA CTAAGGACAC AAGAGACGAG
ATTCAGCTGC TTTCTAAGGA ATTAAGCTTC ATTGATACCA TGAAAAACGT CATGGATTAT
TTCACTATTG ACATTCGAGG CAACGATCAC CTCGACTTCT GTTTTGAAAA TTTTCAAACT
TATGATGAGG CACCAGCACA CGCGCTACAG CAATCACCTC TTCTGGTAGC TATGATAAAA
CGATTTGAAC AACTCTTCCA ATCGCCATAT ATATGTAGTG AGGACTCTTT TGGATTCCAG
CTAAGTCTTG TACACCTACA GAGAGTCTCC AAGATGTATA TAATACGTGT TAAAGCACCA
CTTCTCTCTT GCGACCACGA GACCATTCTC GATATAATGT TCCACACAAA GGACTTCACG
GTTTTCGACT ATTTCGGCCC CTCCTTTCAT TATCAAAGTT CGAGGAGACC ACAGGATGAA
ATTCCATACG AAATACTCGC TCGATCTACA AAGAAAATTC CTATACTTCA CTATACAGAT
GATTTGGATT CTCCACATGT GCTGTTCTTC TTGATCGGTT GTGACTCGGA CATGATTCCG
GACAGACGGA ATAGATTCTT GGACAAAGTG CAACTCGACA TCATATATTC ATACCAATTC
TGCTTCAGGT GCCACAGTAC CCAACACATT ACAAAAAGAT GTCCGGTTCC TAACTACGCT
GTTAGCTAG
 
Protein sequence
MSRVGSISHL EGPLGAPYGE RASNRALNES EAQDIDRNVN DIVARTYLMN LGGESTDAAE 
KGVFEPSFEI PVSTIIAEPA QIRHNHIGGL VVRNQPHLSS TMDSRETSIT KDFHSHVHGQ
IQDIKIAANN DNDMNPTSFE SSNSSAILPE QEVSLHVSKL QEKSKTQKPK NVENLQNPQK
TKKALQNAKN NSKNSNNTKA FNQVIDEQEF PPLETSSKSS KPRPRTTDTT KYTSAPIPRP
NNGPSASQLQ NGVDRNTSAI LQAATTRHEQ LHQILHSTGQ LTQEQDDELD NIYYVHEFAD
YLTDIFWASL EERLKAWNVP KSFCLTALGT ISRIVAERDL VRIRIDGFYK KDGHFDQRHS
MPIKEKAKII ETHLMETLPN RWSAISQALN ELRISMNFIK SQHRPGSKEE YEATKDTRDE
IQLLSKELSF IDTMKNVMDY FTIDIRGNDH LDFCFENFQT YDEAPAHALQ QSPLLVAMIK
RFEQLFQSPY ICSEDSFGFQ LSLVHLQRVS KMYIIRVKAP LLSCDHETIL DIMFHTKDFT
VFDYFGPSFH YQSSRRPQDE IPYEILARST KKIPILHYTD DLDSPHVLFF LIGCDSDMIP
DRRNRFLDKV QLDIIYSYQF CFRCHSTQHI TKRCPVPNYA VS