Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_66419 |
Symbol | NBE1 |
ID | 4851265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | + |
Start bp | 1344695 |
End bp | 1346623 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | |
GC content | 42% |
IMG OID | 640392973 |
Product | Kinase A-anchor protein Neurobeachin and related BEACH and WD40 repeat protein |
Protein accession | XP_001387486 |
Protein GI | 126274251 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.254101 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.342317 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGAG TAGGATCAAT AAGTCATCTG GAGGGACCTT TGGGGGCTCC GTATGGTGAA AGGGCTTCAA ATAGAGCCTT AAACGAGTCA GAAGCACAAG ATATTGACCG AAATGTGAAC GACATTGTCG CAAGGACTTA TCTAATGAAC CTCGGTGGTG AATCCACAGA TGCCGCTGAA AAGGGCGTTT TCGAACCATC CTTCGAGATC CCAGTGTCAA CTATAATTGC AGAGCCGGCC CAAATACGAC ACAATCACAT TGGTGGCCTG GTTGTTCGGA ACCAACCCCA TTTAAGCTCT ACTATGGACA GCCGTGAAAC TTCAATTACG AAAGATTTCC ACAGTCACGT GCATGGCCAA ATACAGGACA TAAAAATTGC TGCAAATAAT GATAACGACA TGAATCCTAC TTCTTTTGAG TCTTCCAACA GCTCAGCTAT TTTACCAGAA CAAGAGGTTT CCCTTCATGT TTCCAAATTG CAAGAAAAAT CAAAAACCCA AAAACCCAAA AACGTAGAAA ACTTACAAAA TCCTCAGAAA ACTAAAAAAG CGTTACAAAA TGCTAAAAAC AATTCGAAAA ACTCAAATAA TACAAAAGCA TTTAACCAAG TCATTGACGA GCAAGAATTT CCCCCTCTAG AGACTTCCAG CAAATCTTCC AAACCAAGGC CACGTACCAC GGACACTACC AAATACACCT CAGCCCCAAT ACCTAGACCA AATAATGGTC CATCTGCGAG CCAGCTTCAA AACGGTGTTG ATAGAAACAC TTCAGCTATT TTACAAGCAG CAACTACTAG ACATGAACAA CTACACCAAA TATTACATTC TACCGGGCAA CTTACACAAG AACAGGACGA TGAATTGGAT AACATTTACT ATGTACATGA ATTTGCAGAC TATCTCACGG ATATTTTTTG GGCCAGCCTA GAAGAAAGAC TTAAAGCATG GAATGTCCCA AAAAGCTTCT GTCTTACCGC TCTCGGTACA ATTAGTCGGA TCGTTGCAGA GAGGGATTTG GTACGTATCC GCATTGACGG TTTCTATAAA AAAGACGGTC ATTTCGACCA AAGGCACTCA ATGCCAATTA AAGAAAAAGC CAAAATTATT GAGACGCATC TTATGGAGAC CCTCCCCAAC AGATGGTCTG CAATCTCCCA GGCCCTAAAT GAACTCCGTA TATCCATGAA TTTCATAAAG AGCCAACACA GGCCGGGCTC AAAAGAAGAA TACGAAGCCA CTAAGGACAC AAGAGACGAG ATTCAGCTGC TTTCTAAGGA ATTAAGCTTC ATTGATACCA TGAAAAACGT CATGGATTAT TTCACTATTG ACATTCGAGG CAACGATCAC CTCGACTTCT GTTTTGAAAA TTTTCAAACT TATGATGAGG CACCAGCACA CGCGCTACAG CAATCACCTC TTCTGGTAGC TATGATAAAA CGATTTGAAC AACTCTTCCA ATCGCCATAT ATATGTAGTG AGGACTCTTT TGGATTCCAG CTAAGTCTTG TACACCTACA GAGAGTCTCC AAGATGTATA TAATACGTGT TAAAGCACCA CTTCTCTCTT GCGACCACGA GACCATTCTC GATATAATGT TCCACACAAA GGACTTCACG GTTTTCGACT ATTTCGGCCC CTCCTTTCAT TATCAAAGTT CGAGGAGACC ACAGGATGAA ATTCCATACG AAATACTCGC TCGATCTACA AAGAAAATTC CTATACTTCA CTATACAGAT GATTTGGATT CTCCACATGT GCTGTTCTTC TTGATCGGTT GTGACTCGGA CATGATTCCG GACAGACGGA ATAGATTCTT GGACAAAGTG CAACTCGACA TCATATATTC ATACCAATTC TGCTTCAGGT GCCACAGTAC CCAACACATT ACAAAAAGAT GTCCGGTTCC TAACTACGCT GTTAGCTAG
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Protein sequence | MSRVGSISHL EGPLGAPYGE RASNRALNES EAQDIDRNVN DIVARTYLMN LGGESTDAAE KGVFEPSFEI PVSTIIAEPA QIRHNHIGGL VVRNQPHLSS TMDSRETSIT KDFHSHVHGQ IQDIKIAANN DNDMNPTSFE SSNSSAILPE QEVSLHVSKL QEKSKTQKPK NVENLQNPQK TKKALQNAKN NSKNSNNTKA FNQVIDEQEF PPLETSSKSS KPRPRTTDTT KYTSAPIPRP NNGPSASQLQ NGVDRNTSAI LQAATTRHEQ LHQILHSTGQ LTQEQDDELD NIYYVHEFAD YLTDIFWASL EERLKAWNVP KSFCLTALGT ISRIVAERDL VRIRIDGFYK KDGHFDQRHS MPIKEKAKII ETHLMETLPN RWSAISQALN ELRISMNFIK SQHRPGSKEE YEATKDTRDE IQLLSKELSF IDTMKNVMDY FTIDIRGNDH LDFCFENFQT YDEAPAHALQ QSPLLVAMIK RFEQLFQSPY ICSEDSFGFQ LSLVHLQRVS KMYIIRVKAP LLSCDHETIL DIMFHTKDFT VFDYFGPSFH YQSSRRPQDE IPYEILARST KKIPILHYTD DLDSPHVLFF LIGCDSDMIP DRRNRFLDKV QLDIIYSYQF CFRCHSTQHI TKRCPVPNYA VS
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