| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_66417 |
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| Symbol | CHP1 |
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| ID | 4851261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 1336721 |
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| End bp | 1339213 |
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| Gene Length | 2493 bp |
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| Protein Length | 660 aa |
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| Translation table | |
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| GC content | 42% |
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| IMG OID | 640392969 |
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| Product | Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) |
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| Protein accession | XP_001387484 |
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| Protein GI | 126274247 |
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| COG category | [Z] Cytoskeleton |
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| COG ID | [COG5069] Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.357299 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATAGCCAGGA GAATCTTCGC GGTCAACTTT TGCTGGTCAG CTTTGTTATT TATCGCTTTT
GGTAGCACAT TTGTCTCAGC TTTGGCGCCA GCTTGTAAAG GGTTCTCGCT TGTTTGAGCA
TCTCGTATAG GCGCTGTTTT GATTTCTGAA ACATACTAGA CGAAGGCTAG AAAGTAGCCC
TCCACCCAAA AGATTAAATT GGCATAAAGA TAAACAAAGA CGAGCAGAAC AGCACCGGTG
CCAGTGACAG ATATACTCAA TTGAGTGCAT AGCCTAACAT CACCGTCCTA AGCAGTTAGG
ATATATACCC GAAGAAAGAC TTTTATAAAG TGTCTGCTCT AAAGTTTTTC TGTATTTCAA
GGAGATATCT TATTAAAGAC TATTGATTCA TTGCATTATA CCCATATTAT ACCCATAATT
CACAAGCATC CAGAGACAAG TTAACGCGGT TAGCGCTTCT TAGCATTTTC ATATAACTTT
GCTATCATAA CATTGCCTAC ATTTTACACT ATGAAAGAAG ACGCTTGGGT CGATCTGCAG
CAAAGAACCC TCGTCAGATG GCTCAACTCT AAGTTGATGG AGGACTCGGA ATCTGAAGCT
ACTCCTACTT CATCTTTGGG CCGTTCCAGT ATCACCAATC TCCGTACAGA TCTTCAGGAT
GGCATTATTC TCATTAAGCT AATCAACTGG CTCGTATATG AAATCACCTC CAACGAGAAT
CATCCGCTCA CAAAACGTAA CACCAAACTC TATTACCTAA CGCCTATCTA CAAAAAGCCA
ACGTTCAAGT TGCAGAAGTT GGAAAATCTC AACGACTTCT TGAAGTTCAT CAACCTCATC
TTGAACGTCA ATGTGTGCAA CATCAGTGCT GACAACATCT ACGAAGGAGA CTTGAAGCTC
ACGCTCGGGT TGCTCTGGTC GCTTTTTGTC TTCAGCACGG CCAATTCGTT CACTTTTAAA
AACGCCAACA CGTCGTTTGT AGAAATCAAG TCCATTTTGC TCGGCTGGGT CAATGACATC
TTAGCTAAGA GAAACTCCCG TGTTTCTAAC TTCAACAAAG ATTGGTCCAT AGACATCAAC
CGACCCGACC GGATTCTTGC AGACATTCTC CACTACTACG GCATTCGCTT TGAGACTCAA
AAAAGTGAAA ACGACGAAAA CCACAATCTC AAGAAACTCA CGCTGGTGTT GAGCTACATT
GAGAACAAAC TTATGATACC CCATTTGATA GATACGGACG ACTTTGCCGT GTTAGTTCCA
GACGAAAAAT GCATAGTGAT CTTTCTCGTT GAGCTCTACA AGGTGTTTGA GATCGAGGGC
CATTTCTTTG AAGATGAAGA AGCTGCTCGT AGCGAGACTG AAACTGAAAT CCAGTACGTG
TTTGACGATA TTCTCAGTAT GTCAATCGAG ACATCAAGAG AGAAGAACAA ATATGAGACG
AGAGCCTTAC GATTTCTCAA CAAAACCAAC TCTTTACTAG GTCAATTGAA TGAAGGCTAT
GAATCGTTAC AAGACATCAA CGCTGGAAAT CTGCTTGAAA CTGACTTGAC CAAGTGTTTA
GAGATGTTGA AAACAGCATT GACTGAACCA ACCATCGAGA ACTTGAACCA TTTCATGGGC
TTCTTTAGCC ACATAAACAT CAAGATGACA TCGTTAGTGA AAGTCAGCCA AACCTTTGAA
AACTACAAAC AGAACATCAA ACCTGATTTA GTATACAAAG ATTTCACTAG CATCAGCAAT
CTTGTCAAAT CTGTCAGAGC CAACTTGCAA AAAATCGATC TCCTCTACTA TCCCTCTATC
AAGTCCCTTA ATATTGAAGC TATGTCGGAC AAGTTGAATG AACTCATGGA ACTCGAATCC
AAGTTCTCAG CTTCTGCTAA CACTTTGGTA GAAGCTTTGA AGAAAGAAGC CAGCCAACTT
CATACCCATT TGAAGATCAT AGAAGATAAC AACTTGAGAG AAGTAGACGA GAAGCTGCCA
CATAAAGATT GGCTTCTCAG GTGCCTTGAT TACTTCGACT ACTTGGTAAA TTTCTACGCC
CGCTTGGATC ATTTCAGTAC ATTGTTGAAC GCTCCAATTC CGACAGCAGA ATTGAAGAAG
GTAATGGAGA CAAATGGAGA ATATGAAGGT GCTTGTAAGG ATTACAAACT TAGCCCTGAA
ATCTTCATTA GCTTCAAAGA GGCGTTTGTG CGCCAGGACA ACTTCATCAA CCACTTTGAG
TTGGTGCGGT TCTTGAAGTC CAATGTCTCG GCTGATGTAG ATCCTAGCAC GATCGAGATG
TTCATCAAGT TAATTCCTAC CAAGTCGGTG CAGACACTTA TCTCTTCAGC TTCATTTTCG
TCGGGCTACT CGTTTTCGTT CTCTGAATCA GAAGATGACT ATATCTTTGA CGAGTTGCAG
AAGAAGGTAG ACTCACAGTT GTCGGGCACC ATCGATCGTG TGTACGATAT TCATGACTTT
ATTGAACAGT TTGAGACTGG ATTCAAGATT TAG
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| Protein sequence | MKEDAWVDLQ QRTLVRWLNS KLMEDSESEA TPTSSLGRSS ITNLRTDLQD GIILIKLINW
LVYEITSNEN HPLTKRNTKL YYLTPIYKKP TFKLQKLENL NDFLKFINLI LNVNVCNISA
DNIYEGDLKL TLGLLWSLFV FSTANSFTFK NANTSFVEIK SILLGWVNDI LAKRNSRVSN
FNKDWSIDIN RPDRILADIL HYYGIRFETQ KSENDENHNL KKLTLVLSYI ENKLMIPHLI
DTDDFAVLVP DEKCIVIFLV ELYKVFEIEG HFFEDEEAAR SETETEIQYV FDDILSMSIE
TSREKNKYET RALRFLNKTN SLLGQLNEGY ESLQDINAGN LLETDLTKCL EMLKTALTEP
TIENLNHFMG FFSHINIKMT SLVKVSQTFE NYKQNIKPDL VYKDFTSISN LVKSVRANLQ
KIDLLYYPSI KSLNIEAMSD KLNELMELES KFSASANTLV EALKKEASQL HTHLKIIEDN
NLREVDEKLP HKDWLLRCLD YFDYLVNFYA RLDHFSTLLN APIPTAELKK VMETNGEYEG
ACKDYKLSPE IFISFKEAFV RQDNFINHFE LVRFLKSNVS ADVDPSTIEM FIKLIPTKSV
QTLISSASFS SGYSFSFSES EDDYIFDELQ KKVDSQLSGT IDRVYDIHDF IEQFETGFKI
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