| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_66409 |
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| Symbol | NUP133 |
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| ID | 4851237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 1286053 |
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| End bp | 1289596 |
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| Gene Length | 3544 bp |
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| Protein Length | 1150 aa |
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| Translation table | |
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| GC content | 39% |
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| IMG OID | 640392945 |
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| Product | Nuclear pore complex protein involved in poly(A)+ RNA transport, nuclear pore distribution, and possibly in the biogenesis of functional tRNA |
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| Protein accession | XP_001387477 |
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| Protein GI | 126274223 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0424209 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AAATTTCGAG AGTCCATTGA TAGCAGCTCC GACATGTCTT TGAACGGTGG TATATTCCGA
GCCCGTAAGC GTCCCAATAC GGCTGTTTCG GTGTCGGAAG TTTCTACCAC TACTATCTCC
ACCTCTAGTG GGTTCCCTTC TACAAAATCG GCACGAGAGT TGACCAAAAA CACGAAGTAC
TGTGTTTCCA AGCTTCCTGC AGTTCCATCT GTGTTAGAGC CGACTTCTTC TAGTTCTTCG
GAGGTGTTTA ATGCTTATTC TGATCATGAA TCTAACTACT CTCTTGTAGT TAATGAGAAG
ACGATCAATG TATGGAGCTA TAAATCCACA GATCCTGCTC CTCTTGCCAT CCAATTCCCC
GTGGAATCAC TTGAAAATGA GCTATCGCTA TTGCCGTTGG CCATTTTGAC CAAGCCGTCA
AGCGGAACGA GCCAAGATCC TGGTTTGGCG ATTTTATACT CTTCCACAGG TAGAATAAAG
TTTTATGAAA GCGTACAACA TGCTCCCGCA TTGGGTCTTA TCAACGACAA GTCGCTTGAA
TTGACAATCC CAATCAATAG CAAGAAGGGA GAATACATTA CTTTGGCCGA AAACGTTGAA
CCAGCAGGTA TCATCGTAGC TACGTCATGG AAGAGATGTG TCTTAATTTC GTTACGAGAC
TTCAAGAGTA AACCGCATTT GTCGAGCGTG GAATTGTTAG GTCCAAACAG CTCACCTAGA
TTATTTCTTT CATCTGTATT GTTTGGAAAT TCTTCGGGAG CTTCTGAGGA CGAAATAGTG
AGCATCAAGT CAGGTAAGAT AACCAACCAT GGTATGACTC AGGAAATTGT CATTCAAGAT
TCGGCTGGAA ATTTCGATTA TTTCACCTAC CAGATGTTGT CTGCAAACGG TTCGCCTTAT
ATCGACAAAA AGAAGTCGTT TAGATACAAT TTGGTATCGG CTGTAGAGAA CAGTGTAGAT
GGATTCTTAC CAGGGGCGTC ATTGAACTGC AAGTTCTTGG ACTTGTGGCC CCTCTTACTG
CAAGAAAACA TATATCTTTG CTTATGTGAC GTTGATGAAT TCAACAGCAA TAGTGGATCG
AAGAACTTGA TGCTCTTGAC TATCAAGATA GATGCTACGG GAGTATTGCT TTATGGAACT
CACAAATTGA TGAGATATGA GCCTCAGCAG ATAGCTTCCT CTACCAACAA ACCCAAATTG
TTTCTTCCAA GTCCGGGAAA TACTGCTTTT GTCACTATTG ACAATTCAAT AATACTCACA
GATATAGATA CGTCTTACAT TCAAAGTCCA ACTACATTTT CATACTACAA ACCCAGATGG
GAAGATGTGA TAAGATTGAA GTCCTCGGTG GAAACAATTG GATTTGGCTA CGAAAACAAG
TCTGCAGACA ACTCTAATAA ATCCAACCCA GCACTTATCA TTATAACCAA GAACTTTGGA
GTCTTGAGAA TAGAGAGATT TTCAGAAGAA GATGATAAAT CAGAAAGCAA GGATCCTACA
GATCCACTTT CCATCGTGAA GTCACATATT GAGCAGGCTA TCTTCTACGC GAAGTCTCCT
GAAATTGAAT TCGACATCTA TAGAGAAGTT CCTCAGAGTG TCGTATTGCT AGCAATTGAA
AGTGTCGTCA CCGAAATTAT CAACTCGACG TCACCATATC TACCAGCTTT TTTGCCTTCT
ATTTCAGAGA TGTTGTTACA GAAGTCAAAA TTATACCAAG AGTTGATTAC TTTTTCCAAC
AGGAACTTCA CAGGTATCAG TTCCAAAATA ATACCCAAAA TAGTGGAATT TTTGGAAAAG
GTAGAGGCAG CATTAAACTT GTGGTTGTAC ATTGATGAGC AACAAGATCC GGAATTGAGG
AAGGTATTGG AGGCTGTAGT TTTAGAATCC AATACTATCT CCTTGTCAGA AAACGATGAA
GTTTTGAGAA CCTTCTTCAG TAAAGGTGTA CAGAATATAA ACCCTGTTTT CACAAACTTA
ACTGAACGTT TGGTTGATAA CGGAAACTCA ACTTCAAACA TTGTCGATCT CATTGTTAAA
GTTTTGTATA ATGGTGTCTA CCAAATCGAG GCCAAGTACT TGTTGAACCA TCTGGAATAT
CCAGTAATAA AGTCGTGGAT TTATGACACT GACTTAGTTG TCAGAATTGA AGATATTTTT
ACCAGTGAAT ATTGCAAGGA TGTCATATTA ACTCAGCAAC GTCAAGCCAA CCTTATCAAG
TTTGTGGAAG TCTTATACTA TTTTGTCACA ATTGCAATCA GATACATGCA ACGTTATGAT
CAACATAGTG AGAGTCTCAG TGATTACTCG AAATGGTACA AATCTAGAAG ACATGCCTGG
ATAAATGTTC TCTTGAAGAA TGCATTGGTA GATGATGCTC TTTCTGTAGC AGAGAGCTAC
AGAGACTTTT CGTCTGTGGC ATTTATCTTG GATACCGAAA AAGAAAAGGG AGATAATGAA
GAGGACATCA ATTCCAAGTA TGGATACTAT TTCGATACAT ACGGTTATGA ATTCGCCTCT
AGTTTGTATG ACTACTATTT GAAGAATGAT AAAATTCAAC CACTTTTGTT GGGATTCACA
AACTACAAGA ACTATCTCGA CCAGTATTTG GAAAAGGGAA CCATCAAGAC ATCATCAGTA
GCATGGATAC GCTATTTGTT GGATCTGGAA TTTTCCAAGG CTTCTGATTC TCTCACTAGG
GCTGCTACCC ACAAAGTAGA TGAGAATATT GAAAATAGAG AATTCAAGTA TTCTCTTGCA
AAGCTTGCTA CAATTGCAGC AAGCAACGGT TCTGGCAATT CCAGAGCCAC TCAGGAAAAA
CTTCAGCTAG CAGAAAACAA CTTGATTGCA ATTAGAAGTC AAAGAGCACT CTTCAAGGCT
TTGGTTGGCG AAGAGCAATT CAAGGTTCTT ACTTACGACT TCGCCAAGCG CTTTTATACA
AACGCATCTG TGGAAAACGA AACCAAAGAT AGGATTCTCG AAGGCTCTTT CACACAATTA
GTGGAAAACA GGCCTATCTC GAACTCAGAC TTGATCAACT GGTTGACGTT ATTGAAGCCA
TCGGCACTTG ACAACAATAA TTTCACTCTT GCACTCAAGG TTGCTTCTGT CGAAGTAAAT
GAATCGAGAT ACCAGTACCT TATCAAATTG ATTTGGCTAA GGTTGTTAGT TATTGGTGAC
GACTGGAGTC TGTTGCACAA GGACTTGATA TCCAGCTCCG ATTCTCAATC GAAGCAGAAG
ATAAGAAAAA CTGTATTGTT CCATACTCTT GTAGAAATTG GCTTGGATGC CAAATTAGTT
GAACAAATGC ATACCTTGTT GAGGAAAGGT CAGATTGATG ATGAGATCGA AGATGATATT
AATGTCAGAG AACATACTAG CTTGTTGTTG GCAAAATTAA CTGATTACCG CGAGGAATAC
AATTTCCAAT CGTGGGTTGA ATCCGTACAA CAGGAAGTGA AGAACTCGTC AAATCATCAA
TATTAAAAGT TGTATATTAC AGAATTAGAT TACGTTAATA AACTGGCATT TCATTACTTA
TTTT
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| Protein sequence | MSLNGGIFRA RKRPNTAVSV SEVSTTTIST SSGFPSTKSA RELTKNTKYC VSKLPAVPSV
LEPTSSSSSE VFNAYSDHES NYSLVVNEKT INVWSYKSTD PAPLAIQFPV ESLENELSLL
PLAILTKPSS GTSQDPGLAI LYSSTGRIKF YESVQHAPAL GLINDKSLEL TIPINSKKGE
YITLAENVEP AGIIVATSWK RCVLISLRDF KSKPHLSSVE LLGPNSSPRL FLSSVLFGNS
SGASEDEIVS IKSGKITNHG MTQEIVIQDS AGNFDYFTYQ MLSANGSPYI DKKKSFRYNL
VSAVENSVDG FLPGASLNCK FLDLWPLLLQ ENIYLCLCDV DEFNSNSGSK NLMLLTIKID
ATGVLLYGTH KLMRYEPQQI ASSTNKPKLF LPSPGNTAFV TIDNSIILTD IDTSYIQSPT
TFSYYKPRWE DVIRLKSSVE TIGFGYENKS ADNSNKSNPA LIIITKNFGV LRIERFSEED
DKSESKDPTD PLSIVKSHIE QAIFYAKSPE IEFDIYREVP QSVVLLAIES VVTEIINSTS
PYLPAFLPSI SEMLLQKSKL YQELITFSNR NFTGISSKII PKIVEFLEKV EAALNLWLYI
DEQQDPELRK VLEAVVLESN TISLSENDEV LRTFFSKGVQ NINPVFTNLT ERLVDNGNST
SNIVDLIVKV LYNGVYQIEA KYLLNHLEYP VIKSWIYDTD LVVRIEDIFT SEYCKDVILT
QQRQANLIKF VEVLYYFVTI AIRYMQRYDQ HSESLSDYSK WYKSRRHAWI NVLLKNALVD
DALSVAESYR DFSSVAFILD TEKEKGDNEE DINSKYGYYF DTYGYEFASS LYDYYLKNDK
IQPLLLGFTN YKNYLDQYLE KGTIKTSSVA WIRYLLDLEF SKASDSLTRA ATHKVDENIE
NREFKYSLAK LATIAASNGS GNSRATQEKL QLAENNLIAI RSQRALFKAL VGEEQFKVLT
YDFAKRFYTN ASVENETKDR ILEGSFTQLV ENRPISNSDL INWLTLLKPS ALDNNNFTLA
LKVASVEVNE SRYQYLIKLI WLRLLVIGDD WSLLHKDLIS SSDSQSKQKI RKTVLFHTLV
EIGLDAKLVE QMHTLLRKGQ IDDEIEDDIN VREHTSLLLA KLTDYREEYN FQSWVESVQQ
EVKNSSNHQY
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