| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_66353 |
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| Symbol | RGD1 |
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| ID | 4851108 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 953852 |
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| End bp | 956037 |
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| Gene Length | 2186 bp |
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| Protein Length | 591 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640392816 |
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| Product | cortical Rho GTPase activating protein |
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| Protein accession | XP_001387418 |
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| Protein GI | 126274094 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.287043 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | CGATATTCCT CTCAGCGCAG CGGTGCCATC CACACAACGT CGCCACAGAG TCCAGAACTG
CCAATTCTGC TAGAATTGCC TTTTTTGTGA TTTTTCTCCA TCTTTTGTTT GTCTTTTTCT
GATTCGATTG AACAGATCAG AGGAATAAGA CTCCGTATTG AACACGAGTT CATAACATTG
AAATCACATT GTAATATATC GATACGTCCT ATTCATAAAT CAATTCCAGT TCATATACCA
TACTCATTTT CAAATCAGAT CTACTGTCAT CTACTTGCAC TACATCAACA TCTCATTATA
CCACCATGCC CGAAGACTCA GCTGCTCTTT TAGACCAAAA CAACATCCAG GAGATCCTAA
ACAGTGACTC GTCGTTGGAC ATTCTCTTGA CTCGTTTGAA GCAGTCCATC ACTACAGGCG
AAGAGTTTGC TAAATACATA AAGAAGAAAG CACAGATCGA AGATGAACAC TTCACCCAGT
TGAAGAAGTT TGCAATGCAG ACGAAAGCGA ACTTCAAGAC CCACCAGGGA AAGTTGAAAA
ACGATTCTTT TTCAAATAAA TTGGAAGCGA TCATTTCTCT AGATGAAAAA CTTCACGACG
TAGGTAATCC ATATGTAAAG GCTCTTACTG TTATGTATGA CGAGTTGTCC TCGTTGATTG
CAACAGTATC GAGATCCAGG AAGTTAATCA AAGACGAGGC CAAAAAGAAA GAAAAAGACC
TTGGTGATGC TTGTCTTGCT GCCGACAAGG CTAAGCAGAA ATACTACCAT TTGTGCGATG
ACTTGGAGAA GTTAAAGACC AGCGATCCTA ACAAAAAGTC ATTCTCGTTG AAGAACAAGT
CAGTAGAGCA ACAAGAGGAC GACTTGCTGA AGAAGGTAGA CTCTGCTGAC CAGGACTACA
AAATGAAGTC TACGGCTTCC AAGAAGTTAA GAGACGAAGT TCTTGTCATC CACAGACCCA
ACAACTCCAA GAAGCTCAAA AACTTGATCT TGGAAATGGA TATTGCTATG AATGTTCAAT
TGCAAAAGTA TGCAACATGG GAAGAGAACT TGATCATGAA TTCTGGTGTC ACCATCAGTC
CGATCCAGTC CAACAAGCCC TCCATCAAGG CTTTGGCCAA TGCTATCGAT AACGAGAAGG
ATCTCTACGA TTATTTGGTC AGGTCTGAAC GATCTGTAGC ACCCAATAAG ACCTTAATAC
CCGTGGAGTA TGTCTTGCAT CCTTCTTTGG CTAAAAACCA AAGAATAAGC AAACCCTTTC
TCAATACCAG TGCTCCAAAG AATAACCACA CCAACGTTGC GGCTGCATTC AACTCCAAGA
GTCACAGTGG CACACCTCAT GCCGCTACTC CAACCTCCAC CAGTCTTCCT CCTCTCCCTA
TTGAGATAAA CAGTAATAAT GCTAGCACTG TTCCCAGCTC TAACGGGAAC AACAATACTA
ACGGTAGCGG ATTAGGCGAC TCTGGTACTG AAGCCAAGTC ACCTAGTTTC TATAGTTCGT
TAGATCCAGC ATCTCAGTCC AACACTCCTG AACTCAAGGG ACCTAAGGTT CTAAAGACCC
AGATATCTCA GCCTACGTTT GGAGTATCAA TTGAAGATGT TATCCAGTAC GCTGGCCAAG
ATAACGTGCC CTATGTCGTC AAAAAGTGTT TCGAAACGAT AGAAAGATAC GGCCTAGACC
TCGAAGGCAT CTACAGAACG AGTGGAAACA AAGCTGCTGT GCAGCAGTTG AAGGATTCTA
TTGATCAAAA CTTCACCAAC TACTTGTTGA TTGGAAGCAA CATCGATGGA ACCAATGTTC
ATGATGCTGA TATTGTCTGT GTAGCTTCGT TGGTGAAGTT GTATTTTGCT AGTTTGCCAG
AGCCTTTGCT TACCAACGAG TACCACCAGT CATTTATTGA AACTGTTAAA TCGCTTGACG
AAACTTTTAT CGCTAAGAAA TTGCACCATT TGGTGTTCAA CTTGCCTGAT GGAGCGTACT
TCACATTGAG AGCGCTCATC TTTCATTTGA ACCGCGTCGC AGAGCACCAG AGCAGTAATA
GAATGACTGC TAAGAGTTTG GCCATTATCT GGGGACCCGT TATATTGAAC GACAACAGCA
TGAACCCACA AGATTTGAGC TACAAGAGTA AAGTCGTGGA GGAGTTGATG CTTATTGCCA
ACGAGATCTT TGATCCCGAC GAATAG
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| Protein sequence | MPEDSAALLD QNNIQEILNS DSSLDILLTR LKQSITTGEE FAKYIKKKAQ IEDEHFTQLK
KFAMQTKANF KTHQGKLKND SFSNKLEAII SLDEKLHDVG NPYVKALTVM YDELSSLIAT
VSRSRKLIKD EAKKKEKDLG DACLAADKAK QKYYHLCDDL EKLKTSDPNK KSFSLKNKSV
EQQEDDLLKK VDSADQDYKM KSTASKKLRD EVLVIHRPNN SKKLKNLILE MDIAMNVQLQ
KYATWEENLI MNSGVTISPI QSNKPSIKAL ANAIDNEKDL YDYLVRSERS VAPNKTLIPV
EYVLHPSLAK NQRISKPFLN TSAPKNNHTN VAAAFNSKSH IIMLALGLGD SGTEAKSPSF
YSSLDPASQS NTPELKGPKV LKTQISQPTF GVSIEDVIQY AGQDNVPYVV KKCFETIERY
GLDLEGIYRT SGNKAAVQQL KDSIDQNFTN YLLIGSNIDG TNVHDADIVC VASLVKLYFA
SLPEPLLTNE YHQSFIETVK SLDETFIAKK LHHLVFNLPD GAYFTLRALI FHLNRVAEHQ
SSNRMTAKSL AIIWGPVILN DNSMNPQDLS YKSKVVEELM LIANEIFDPD E
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