| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_66227 |
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| Symbol | EFG1 |
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| ID | 4850800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 89185 |
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| End bp | 91665 |
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| Gene Length | 2481 bp |
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| Protein Length | 485 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 640392508 |
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| Product | Nuclear receptor coregulator SMRT/SMRTER, contains Myb-like domains |
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| Protein accession | XP_001387672 |
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| Protein GI | 126273547 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.271146 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AATTGCTTGA AATCAGCGAA GGATATCCAG CGGCTTCTGA CAGTAGACGG AGTCGGAGCA
TATTTGAAGA TTCCAAGGAC AAAATAGTGA ATCGCACCAG GGCGTAAATT CCATAGCCAA
ATTCCATAGT TTCAGTAATA TTGCTCAAGT GTACTCCTTG AAATAATTGT GCCAAACTGT
TTAAAACAAC AACTTCACTT TCTTCCCCAT CAATAACAGT TGACTAGTTT TTCGTTGATA
TCAAAATCCA GTTAGAAGGG GCCTGAGAAT TTCATTTGTA CATTTCCACA GCCTGTTAAC
TACAACGTTA CCAACCTAGC GATTCAAGCT AGCACAACAC ACGAGCTTTT TTCCTACAGA
GTCCAGCACC TGTGCCCTTG ATATTGGTAT TCTTTTTCCT CGTCACGTTT GACTTTAGAG
GTCCAGTTCA TTGCATATCC TTTTTCTCGT AGCCTCAACA TATCCCAACG TTACCGAAAA
GGTTGCTCAA GTTTTTCGAG GTTTACGTAC GTCTGTAAAG CAGAGCTATT GATCCAGAAT
ACTTGTGAGT TCTCCTGAAC CATACAAGCT TTCACCAGCA TCAGATTTCA AGATCATTTC
CAATTATTTG TATTTCAGCT GTAACGTTCC TTAACACCAA GAGTAACCAT TTATCCCCCA
TTTAGTTCTA GTACTTGTTT CCCCACCTGT ATTACTTTCG TTTTGTATTA TTTCTACCAA
ATCATCTGTA TTAGTATCCA TCACAATGTC CTCCGAACAA AATAATATTG GAATGCCTAA
AGCCCTTTCC GCTCAGTTAG AGGATGGCAC GGCCAAGTCT TTGCTAGACG GACAAGCAGC
ACAAAAGTTA AAGGATGATG TGACTGACCC GGTGTTGGTT GCCGATGAGG GCCTTGACGC
CGACGGTTCT CCCAAGAATT ACAAGAATTT GTCGATAAAC CTGATACTAA ACATCCATGG
AAAGGTCCAG GTTCAAAACC CCAATCAAGC CTATGGTACC AACCCCAAGT TGCCTTCCAT
CGGTTCCGTT CCCGGAGTAC CGAAAGATAT GTCAACAAGT CAACAGCAAC AGCAACAGCA
ACAAGATCTT TCGCCCAAAT ACCTTCCTTA CCAACGTAAT CAATATTTCA ATCACCACCT
GAGGTCTGTT TCATCTATCG ACAACAAGTT GGCTGCGACT TCTTTCACAG ACTCGCCTCA
ACAAACACAA CAGAGAACGC TGGTCGGACC TTATGGTGAT AATATAGCGT ACCAGCAGCC
TCCGGGAGTA GCTGAAGCTG CCCATTTGGT CAACCTTCAG CAGACGACAG GCTCCAACGC
TTCCCTGGTC CAGAGTCAGT ATGGCCAAAA TGTAGCATTA GGCTATGGCC ACTTGGTTCA
GCCAGGTAAC CAGCCGATGT ATCCGTCACA TGCTGCAACT AATCTGGTTC CTCAGCAGAT
GATTAGTGGA GGAAACCAAA TGCATCAATT GCTGTACAAT CCTCTTCATC ACCAATCGCA
CCTGGCTCTG GACCTCGATC CGTTGCACGA GAGCAAGAGA GGAAGGCGTT TCAGAAGGAG
ATACAACCAG ATTGTCCGCA AGTACAACTG TTCGTATCCT GGATGCGTCA AAAGTTATGG
GTCGCTCAAC CATTTGAACA CCCATATCGT GACCAAAAAG CACGGTCATA GAAAGTCTAA
GGCGGATTTT CAACACAACC AATTGTCGGA AGATGGAACC AGCAACAATA CCCAACAGGG
GCCCTACGAC GCAAGTAACT ATCCGTCACA CCTTCAGCAA CACTCTCCGT CAGATTACAC
ACAGGGTAAC TACTGGTACG GCTACAATCC TCAGGTTAGA AGCAACCAGC AAGTAGCAGC
TCCACAGCAA CAAATGGAGG TACATGCCAA TACCGTAGCA CCGCCAGGAT CGATACCAGC
ACCTACGTAT ATGTACTACC AGCAGGGCTA TCCGCAACAT ATTCCTCCTC CAATTTCACA
GCAGCGACCG CCAATGGGCT GGCCGCAACA AACATCGTAT CCATACACAC AAATGCAAGG
CCTGACTCTG CAACAGTCAT ATCAACAGAC AGCACAATCT ACGCAAACCT CCAGCATCCT
CCAGCAACAC CAAGTTCAGC ATGACCCCGG CCAGCATTCT GACCCTCAAA TGAAGTCTGC
ACTGGAATCT TCCACTGGCA CAAGCCCACC GTTGAAGAGA TGAACAGCGG CTGCGATTGC
TTGTTCTAGG TGTACATTGT AAGGCTGGAA AAAGGATTGA CCATGATCCT ATCCTTACTT
ATTTATTTGA CTTTTATGAT AGATACGAAT AGATACATTC TTTATCAAAA TTTTGCCCGT
CGTGCTACCG CAACTCTCGC AGTGTTTGCT CCTTACATGG ACCTTCTGCT GACGAGCAAC
ATTCTTTCGC TTTTAAGGCA TTTTTTGACG TTTCTTGATA AAACCAAAAG TTCTGATCTT
TTAATGCACG TCATCCCCCA C
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| Protein sequence | MSSEQNNIGM PKALSAQLED GTAKSLLDGQ AAQKLKDDVT DPVLVADEGL DADGSPKNYK
NLSINLILNI HGKVQVQNPN QAYGTNPKLP SIGSVPGVPK DMSTSQQQQQ QQQDLSPKYL
PYQRNQYFNH HLRSVSSIDN KLAATSFTDS PQQTQQRTLV GPYGDNIAYQ QPPGVAEAAH
LVNLQQTTGS NASLVQSQYG QNVALGYGHL VQPGNQPMYP SHAATNLVPQ QMISGGNQMH
QLLYNPLHHQ SHLALDLDPL HESKRGRRFR RRYNQIVRKY NCSYPGCVKS YGSLNHLNTH
IVTKKHGHRK SKADFQHNQL SEDGTSNNTQ QGPYDASNYP SHLQQHSPSD YTQGNYWYGY
NPQVRSNQQV AAPQQQMEVH ANTVAPPGSI PAPTYMYYQQ GYPQHIPPPI SQQRPPMGWP
QQTSYPYTQM QGLTLQQSYQ QTAQSTQTSS ILQQHQVQHD PGQHSDPQMK SALESSTGTS
PPLKR
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