| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_64901 |
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| Symbol | NEM1 |
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| ID | 4851335 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 1530250 |
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| End bp | 1532239 |
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| Gene Length | 1990 bp |
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| Protein Length | 401 aa |
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| Translation table | |
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| GC content | 42% |
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| IMG OID | 640393043 |
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| Product | Nuclear Envelope Morphology |
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| Protein accession | XP_001387525 |
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| Protein GI | 126274376 |
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| COG category | [K] Transcription |
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| COG ID | [COG5190] TFIIF-interacting CTD phosphatases, including NLI-interacting factor |
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| TIGRFAM ID | [TIGR02251] Dullard-like phosphatase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTTGT AGACTGCTGT GGGTCGGTAA ATAAACTCAT CTCGTCACAT CGGTGTTCGG
CCATCTCGTC CTAAACTACC CATTCTATAC TACCTACTAT ATCTCAAACT CATATTGACA
CAGGCATAGA TTCGTAGAAT CTCAACTATC ATTAGCCAAG TATTACTTCA ATCGCCCGCA
AGTTCAACAA CCACATAAAG GCAACGCCAG CTTCCATTGC AGCCGCAACA TCTTCGGGCT
GTACCTCCTT CAACTGCTTC ATTATCATCG TATAGGATCA AATCAGATCA TCCACTTGTC
TTATCATACT GTGAGACAAT ATCTAGTACC TTCACTACCA TTCACGCTTC ATCCTTCCGT
CTTACAACTA TTCTTTACAT CTCGCTGCAG ACCTCCATGG ACATTTCGCA TAACTATGAA
CTCGCTTAAA ATAATAGTTA ACTCCTTTGA TACGCTCTAT CCGAAAAAGG ATTACGAACT
CACAAGCTCG GCTCAAGACC TCGACGAAGA AGATGACATA GATGATGCTG GCGAAATTAA
TTTAGCCAAA GCAGACATAG CGGAGCCCAA TGAAAGCACA ACCAGCATCA ACAGTAATGT
GAACAACTCC GGCTCTTCTA CCGCAACCAT GACTATTACC GAGTCTCCCG TGACGCAGGC
ACTTCCGGCT GATTACGAGA AAATCATGGC CAAACAGAGT TCTGAACAAG ACTCGATATT
GCGGTCCATC GCAAACCTTT TACGCTTTGC TATCAAGACC ATTTTGTTTG TGCCCAACGT
ACTCATAGTG AAACCTATCA GCTTCATGTG GCTCCTTGTG ACTTTCCCAT TCATCTACAC
CTTTGAACAA CTCGGACTCG TTAACTTTGG GAAGTCCAGC CTGATTGTAG TCAAAGAAAT
TCCAGAGTCG ATGGATTCTT CCTACGAAAA AATCTTACCA GAACAGACAG AGATAGAGGA
AGACATCGAC TTGATAAAAG ACGACAGCAA TATCAGTAAA CTTCGTCGCA ACAATAATAA
CATTAGTAGC GGTAAAATAA TGACAAGCTC GTCTTCAACT CCTGACCAGC GCTCGGAAAT
AGACGATAAG ACCGAGATCC TCAAACAGGA AAACATTCTT TCCAACAACA TCAAATCTCC
AACCTCATAT TCCAAATACA TAATACCGCC ACCATTACGA TTATATCCCT TATCCAGAAA
TCCACAGAAG AAACGTAAGA GAAAGACTCT CATTCTCGAT CTTGACGAGA CGTTAATCCA
CTCTTTATCA CGAGGTTCTC CCCGTTCTTT TAACACTTCG TCGTCTTCGG CTCCGAAAAT
GATCGAAATC AAACTCAACA ATATTGCATC TCTATACTAC GTTCACAAAC GGCCCTATTG
TGACTACTTC CTCAAAGAAA TCTCGAAGTG GTTTGAGCTC CAGATCTTTA CGGCTAGTGT
CAAGGAATAC GCTGATCCAA TCATTGACTG GTTGGAAAGT GACATAATAG ACAACTCCCG
GAAGAACTCC AAGCATGAGT CAGACTCAGA GGTTCCCAGC AAAATCTTCA CCAGAAGATA
CTACAGAACC GATTGCACAT ATCGACAAGG AGTAGGATAC ATCAAGGATT TGTCTAAGTT
CTTCGCCAAA GACGATGAGC TTAAGAACGT AATTATCCTC GACAATTCTC CCATAAGTTA
TGCTCTTCAT GAAGATAATG CCGTCATGAT TGAAGGGTGG ATCAACGATC AGCGAGACCG
CGATCTTTTG CATTTGTTGC CCATGCTTCA CAGTTTGAGT CTCTGTATAG ATGTAAGGTA
CATCTTGGGC TTGCGACACG GAGAGAAGTC CTTTGAAAGG TAACCAATTA TATCATTACT
ATTAATCTCA ATATTTATTG CTTGCTTTAA TGAACTAGAG TCAAAACATC AACTCCAAAA
TTACACCGTT AATAGAAAAG TTTTGAATTA GATACTACAT ACATTTATGT CAATGTATAC
GATTGCATTT
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| Protein sequence | MNSLKIIVNS FDTLYPKKDY ELTSSAQDLD EEDDIDDAGE INLAKADIAE PNESTTSINS
NSSEQDSILR SIANLLRFAI KTILFVPNVL IVKPISFMWL LVTFPFIYTF EQLGLVNFGN
KLRRNNNNIS SGKIMTSSSS TPDQRSEIDD KTEILKQENI LSNNIKSPTS YSKYIIPPPL
RLYPLSRNPQ KKRKRKTLIL DLDETLIHSL SRGSPRSFNT SSSSAPKMIE IKLNNIASLY
YVHKRPYCDY FLKEISKWFE LQIFTASVKE YADPIIDWLE SDIIDNSRKN SKHESDSEVP
SKIFTRRYYR TDCTYRQGVG YIKDLSKFFA KDDELKNVII LDNSPISYAL HEDNAVMIEG
WINDQRDRDL LHLLPMLHSL SLCIDVRYIL GLRHGEKSFE R
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