| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_64825 |
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| Symbol | MET30 |
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| ID | 4851050 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 814500 |
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| End bp | 816967 |
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| Gene Length | 2468 bp |
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| Protein Length | 612 aa |
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| Translation table | |
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| GC content | 42% |
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| IMG OID | 640392758 |
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| Product | SCF complex F-box protein MET30 |
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| Protein accession | XP_001387792 |
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| Protein GI | 126274036 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.138944 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TCACAATCTA GAACGTGTTG ATATACGGGT CACGCAGGCC ATTACAAACA CGGAGAAAAC
AAAATAACTT TACTCATATC TATAAATATT TATTGGAGTC CACTCTGAGT ATTAGTCTCA
TCACACTTTA TCTAATTTTT GTAACTGCTT TAGTAGTTTC GTTTTGTTTT ATGGCATCTG
CACCAAAATA GTTACTCACC ACATTATGAA CTTACAAGAG TCATGTATTC CTCAGGAAGG
GTCGTCTTCC AGCAAATTCG ACAGCTTGCT AACCACCGCC AGCAACAGTA AGTCGTCAGA
CGAGACGTCC ACGAGCTTCC GTCACATGAT GAACTACACC AGTAATATAA GTAATATCAG
CAACATCACT ACTAGCAGCA AATCAAACAG TATAAACAGC ATAGAGTCTT CAAAAACGTC
GCTTGTCAGT GAAGTTGATC TGATACCCTT CACCAGACTC GAGACTCCAC CACCACCTCC
TTCAGCCGAG CTGGATGTTT CAGTAGTGAC ACCTTTTCTT GTGAAGCACA TCAGCGACCA
GCTGTTAATT CCTAAAGACA ACTTCCACAA GTACTGCTAC AGACACAATC CGGACATCAC
TTGTAACAAA CGGACGGATG AAGACAAGAT GAAGAAGATA CAAACTGCTT TGGATAAACT
CCCCTCTAGG GACCAGGAGG CCATAGCTCA TGTGTGGTCG ATTTTCTCTG CCGCCCCCAG
TGCACATCGT CAGATTATCC TCAACGGGAT ATTGACCCAG TGTTGCTTTC CACAATTATC
GTATGTTGCC CAAGAGGTAT CATCGCTCAT TAGAATTGAT TTCATCTCCA CTTTGCCTGT
AGAGATCTCG CTAAAAATTT TGTGCTATTT GGATTGCAAT TCTCTTTGCA ACGCAGCACA
GGTATCCAGA AAATGGAAGT CGTTAGCTGA CGATGATAGG GTCTGGCACC ACATGTGTGA
ACAGCATATA GATCGTAAAT GTCCTAACTG TGGCTGGGGC TTGCCTTTGA TGCATATGAA
GAGAGCTCGT GAGATGACTG AAGAAGACAT TAAGCCTATC TTAAAACGTA GGATAGAAGA
AATTACAAGT TCGGCTAATA ATGAGGTCTC GTTCAATGCT GGTGAAGCTT CTGCAGCCAC
ATCTTCTACT TCCTCTTCTT CTCTTGAATC TTCTGAACAA GACGCCAAGA GAATGAAGTT
GAGCTCATCA CAGGAACTGC CACAGCCCCA GAAGCAGTTG AAGAAGAGAC CATGGAAATC
TGTCTACTCA GAAAGATTTA AGTTGGAGAA GAACTGGAGA AAGGGTATTT ACACTGTGAA
AAAGTTCTTG GGTCATACTG ACGGAGTCAC ATGTTTGCAA TTCAACCGTA AGTACCTCAT
GACTGGCTCT TACGATACAA CCATAAAGAT TTGGAAGATT GAAACTGGTG AATGCTTGAA
GACGTTGACT GGCCATACGA AGGGAGTCAG ATCTTTGGTG TTTGATTCAC AGAAATTGAT
TACTGGTGGT CTTGATTCGA CTATCAAGGT CTGGAACTAC CATACTGGTC AGTGTATTGC
TACTTACAAG GGACATGAAG ACGCTGTGGT ATCTGTAGAT TTTTCCAACA AGTCTATCGT
ATCTGGATCT GCTGACCATA CCGTCAAGGT GTGGCATGTA GACTCGAGAA CCTGCTACAC
CTTAAGGGGA CACACTGACT GGGTCAACTG TGTCAAAATC CATCCACAGT CCAACACTAT
CTTCAGTGCT TCTGATGATA CCACCATTAG AATGTGGGAT CTTCAGAACA ACCAGTGCTT
AAGGGTGTTT GGTGGAATGG ATAAGAATGG ACATATTGGG CAAGTTCAAA GTGTCATTCC
CTTTACTTAT AAAGAAGAGT TGATTGAAGA TGGAAGTGAA AGTGAAAGTG AATCCAACCA
TTTACATAAC TCGAGTCACA ACCGTACTGG CGGAGGTTCT ATTTCAGGTG TTGCAACAGG
AAATGAACCT GCCGAGAACC TTGACGAAGT AGACGAATTG CCTTGGAATC CTAACTATCC
AACGCATTTA TTGACTTCTT CTTTGGATAA CACCATAAAG TTGTGGGATG TGAAGACTGG
TAAATGTATT AGAACCCAGT TTGGCCACAT CGAAGGTGTG TGGAGTATTG CTGCTGATAC
TTTCAGAATC ATCAGTGGTG CCCACGACAG ATTGATCAAG GTATGGGACT TACAGAATGG
TAGGTGTTTG CATACTTTTG GAAACAATGC CAGTGTCAGC TGTGTCGGTT TGAGCGATTC
GAGATTTGCT GCTGGTTTGG AAAGCGGAGC TGTGAAGATG TACTGTTTTG ATTGAATACA
GCTTGCGAAC CTACTAATGA TAATTATTAA AATTTGTACT ATACTTTATT TGGGTCATGT
TTAAGAACTA CTGAATTTTC AACTATATAT TGGGATTATT GGGTATATTT AATGGATAAG
TTATATCT
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| Protein sequence | MNLQESCIPQ EGSSSSKFDS LLTTASNTEL DVSVVTPFLV KHISDQLLIP KDNFHKYCYR
HNPDITCNKR TDEDKMKKIQ TALDKLPSRD QEAIAHVWSI FSAAPSAHRQ IILNGILTQC
CFPQLSYVAQ EVSSLIRIDF ISTLPVEISL KILCYLDCNS LCNAAQVSRK WKSLADDDRV
WHHMCEQHID RKCPNCGWGL PLMHMKRARE MTEEDIKPIL KRRIEEITNA KRMKLSSSQE
LPQPQKQLKK RPWKSVYSER FKLEKNWRKG IYTVKKFLGH TDGVTCLQFN RKYLMTGSYD
TTIKIWKIET GECLKTLTGH TKGVRSLVFD SQKLITGGLD STIKVWNYHT GQCIATYKGH
EDAVVSVDFS NKSIVSGSAD HTVKVWHVDS RTCYTLRGHT DWVNCVKIHP QSNTIFSASD
DTTIRMWDLQ NNQCLRVFGG MDKNGHIGQV QSVIPFTYKE ELIEDGSESE SESNHLHNSS
HNRTGGGSIS GVATGNEPAE NLDEVDELPW NPNYPTHLLT SSLDNTIKLW DVKTGKCIRT
QFGHIEGVWS IAADTFRIIS GAHDRLIKVW DLQNGRCLHT FGNNASVSCV GLSDSRFAAG
LESGAVKMYC FD
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