Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_53948 |
Symbol | OSM2 |
ID | 4851951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | + |
Start bp | 3283741 |
End bp | 3285720 |
Gene Length | 1980 bp |
Protein Length | 659 aa |
Translation table | |
GC content | 46% |
IMG OID | 640393659 |
Product | Osmotic growth protein |
Protein accession | XP_001386951 |
Protein GI | 126276120 |
COG category | [C] Energy production and conversion [I] Lipid transport and metabolism |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [COG5274] Cytochrome b involved in lipid metabolism |
TIGRFAM ID | [TIGR01813] flavocytochrome c |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.621591 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTTCTC CAAATACTCT TCCCCGGAAT CCTATCATCA TCGTTGGTGG TGGGTTGGCG GGACTCTCTG CTGCGCACCA GACATATCTC CGAGGAGCCA ATGTGATTCT CTTGGACAAG CAGGGGTTTC TCAGTGGAAA TAGTGGAAAA GCTACATCCG GGATCAACGG AGCCTTGACG AGGACACAGG TTGATCTCGA AATCAAGGAC TCGGTGCAAC AGTTCTACGA CGACACTTTG GCTACTGCTA AGGACAGGGC CAGACCAGAC TTGATCAAGG TGTTAACTTA CCATTCCGCA GATGCCGTAC ATTGGCTCCA GGAAGTGTTT GACTTGGATT TGACAGTTGT GTCGAGATTG GGGGGTCATT CCCAGCCCAG AACCCACAGA GGAAAAGACT CAAAGTTCCC AGGCATGGCC ATCACGTATC GGTTGTTGGA AACCTTGGAA GACTTAGCCT TGGCTGAACC CCACAGGGTG TTGATCTTGA AGAACTGTCA GGTGATCGAC TTGGTGAAAC AGGACCACAA GGTGACTGGG GTGAAGTACA AGAACTTGCT TGACAAGACG AAACACGAGT TGACTGGTCC TGTGATCATG AGTACAGGTG GGTATGCCGC TGACTTCACC AAGAACTCGC TCTTGAAAAA GTACAGACCT GATATTATTG ACTTACCTTC TACGAATGGA AACCATGCCA CTGGTGATGG CCAGAAGATC ATTATGAAGA ACAAAGGTGT GGGAACCGAC TTAGACAAAG TACAAGTGCA TCCTACTGGC TTGATTGACT ATAACGACAC CGACACCATT CTGGGTAAGA AGGTTCCCCG TTTCTTATTT CTAGGAGCTG AGGCACTTCG TGGTGAAGGT GGGATCATCT TGAATGCTAA AGGCGAACGT TTTGTGGACG AGTTGGGACC CAGAGACTAC GTCAGTGGTG AAATGGAAAA ACAATTGAAG TTGGGCAATG GGCCATTAAG ATTGGTTTTG AATGAAGCCA GTGAAAAGAA CTTGGAGTTC CATGTCAAGC ACTACAAGGC CAGAAACTTG ATGAAGACTA TTTCTGGAAA GCAGCTACTT GCTGATTTGG GGTTGTCTGG ACATCCCGAA AAGTTGGAAC TGGTATTTGC TACTTACAAC AAAGCTGCTC GTGGCGAGAT CAAAGATCCA TTTGGGAAGA AGTTCTTCCC AGCCACTCCC TTCGAGTACA ATCCTGATGC CAGCTACCAT GTCTCTTTCA TTACCAGAGT GTTGCATTTT ACAATGGGAG GTGTTAGAAT CAACGATAAA GCTCAAGTAA TGTACCAAGT AGGAGAAGAC GAATATGAAC CTTTTGAAGG CTTGTATGCT GCTGGAGAAT TGGCTGGAGG TATCCATGGT CACAATAGAC TTGGAGGTTC TTCTCTCTTA GCGTGCGTAG TCTACGGAAG ATTAGCTGCT GATCAAGCTA CCAGTTATTA CATGAACAAG TTGAGTGAAG GTCCTGTAGG ATCATCATCT TTGAACAGAT TGCAAATGAT CAACTTACAC ATTGATCCAA ACAATCCACA GAAGGTCACC ATAGAATGGG GCGAAGGCAA CCCTTCTACT GGAGATATTA ACTCTTCTTC TACTGCTACT GCTGCTGCTA CTGCGACTTC TAATAGTAAT ACATCTACTA CCGCTCCTGC TGCTACTCCT GCTGCTACTG CTACGGAAAA ATTTAAGCTG TTTGAGATCC CTGCCAAGGA GTTCACCTAC GAAGATGTTG CTAAGCACAA TAAACGTGAA GACTGTTGGG TGGTGGTGAA GAACGTTGTC TTGGATTTGA CTCCGTTCTT GAAGAACCAT CCTGGGGGAA TGGAGTCGAT CGTCAACTAC GCGGGCAGAG ATGCTACAGA GAGCTTTGAG ATGTTGCACG AAGATAACTT CATTGAAAAG TACACTCGAG ACTGTGTCTT GGGTAGAATC AAAGGCAAGA CCCCAGCATT GAACTTATAG
|
Protein sequence | MSSPNTLPRN PIIIVGGGLA GLSAAHQTYL RGANVILLDK QGFLSGNSGK ATSGINGALT RTQVDLEIKD SVQQFYDDTL ATAKDRARPD LIKVLTYHSA DAVHWLQEVF DLDLTVVSRL GGHSQPRTHR GKDSKFPGMA ITYRLLETLE DLALAEPHRV LILKNCQVID LVKQDHKVTG VKYKNLLDKT KHELTGPVIM STGGYAADFT KNSLLKKYRP DIIDLPSTNG NHATGDGQKI IMKNKGVGTD LDKVQVHPTG LIDYNDTDTI LGKKVPRFLF LGAEALRGEG GIILNAKGER FVDELGPRDY VSGEMEKQLK LGNGPLRLVL NEASEKNLEF HVKHYKARNL MKTISGKQLL ADLGLSGHPE KLELVFATYN KAARGEIKDP FGKKFFPATP FEYNPDASYH VSFITRVLHF TMGGVRINDK AQVMYQVGED EYEPFEGLYA AGELAGGIHG HNRLGGSSLL ACVVYGRLAA DQATSYYMNK LSEGPVGSSS LNRLQMINLH IDPNNPQKVT IEWGEGNPST GDINSSSTAT AAATATSNSN TSTTAPAATP AATATEKFKL FEIPAKEFTY EDVAKHNKRE DCWVVVKNVV LDLTPFLKNH PGGMESIVNY AGRDATESFE MLHEDNFIEK YTRDCVLGRI KGKTPALNL
|
| |