Gene PICST_53805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_53805 
Symbol 
ID4851782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp2815193 
End bp2815822 
Gene Length630 bp 
Protein Length209 aa 
Translation table 
GC content44% 
IMG OID640393490 
Productpredicted protein 
Protein accessionXP_001387101 
Protein GI126275586 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.984982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCAT CTCATTCAAA GGGTTCTCCT TACGGTGCCA AAATCACTGC CATTGAAGAG 
TTAGACAAGG GCAACTGGAT TCAGACCAGA AAGATCAAAT ACCAGGATCC CCACGGAAAC
GATCGACTCT GGGAAATGGC CATTAGAACT ACCAGATCTG AAACTACCAA TGTCGATGCT
GTATCAATCA TAGCTATTTT GGAAAAAGAA GGAAGAGATC GTGAAGTTGT ACTTATCAAA
CAATTCCGCC CGCCCACTGG TAAAGTTGTT CTAGAACTTC CAGCAGGGCT CATAGACCCA
AAAGAATCGA TAGCCAGCAC TGCTGTCAGA GAATTGATTG AAGAAACAGG CTACTACGGC
ACTTTTGCTA GGGAATCTGT TGCTGTTTTC AGCGACCCAG GCTTGACCAA TGCTAATATG
GTGTTGGCAT ACGTAGATGT AGATCTCTCA GATCCCAGAA ATAAGAACCC TAAAGCAGAA
TTGGAGGACG GCGAGTTCAT CGAAATGTTC CACTTACCTT TGAAAGGCCT ATTGGGCAAG
TTGGAAGAAT TGGTAGAAAA GGAAGGTTGT ACAGTAGATG CCAGATTGTA CCATTTCGCT
GTTGGGTTGG ATATCGCTCA AAGTCTCTAG
 
Protein sequence
MSSSHSKGSP YGAKITAIEE LDKGNWIQTR KIKYQDPHGN DRLWEMAIRT TRSETTNVDA 
VSIIAILEKE GRDREVVLIK QFRPPTGKVV LELPAGLIDP KESIASTAVR ELIEETGYYG
TFARESVAVF SDPGLTNANM VLAYVDVDLS DPRNKNPKAE LEDGEFIEMF HLPLKGLLGK
LEELVEKEGC TVDARLYHFA VGLDIAQSL