Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_53805 |
Symbol | |
ID | 4851782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 2815193 |
End bp | 2815822 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | |
GC content | 44% |
IMG OID | 640393490 |
Product | predicted protein |
Protein accession | XP_001387101 |
Protein GI | 126275586 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.984982 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGTCAT CTCATTCAAA GGGTTCTCCT TACGGTGCCA AAATCACTGC CATTGAAGAG TTAGACAAGG GCAACTGGAT TCAGACCAGA AAGATCAAAT ACCAGGATCC CCACGGAAAC GATCGACTCT GGGAAATGGC CATTAGAACT ACCAGATCTG AAACTACCAA TGTCGATGCT GTATCAATCA TAGCTATTTT GGAAAAAGAA GGAAGAGATC GTGAAGTTGT ACTTATCAAA CAATTCCGCC CGCCCACTGG TAAAGTTGTT CTAGAACTTC CAGCAGGGCT CATAGACCCA AAAGAATCGA TAGCCAGCAC TGCTGTCAGA GAATTGATTG AAGAAACAGG CTACTACGGC ACTTTTGCTA GGGAATCTGT TGCTGTTTTC AGCGACCCAG GCTTGACCAA TGCTAATATG GTGTTGGCAT ACGTAGATGT AGATCTCTCA GATCCCAGAA ATAAGAACCC TAAAGCAGAA TTGGAGGACG GCGAGTTCAT CGAAATGTTC CACTTACCTT TGAAAGGCCT ATTGGGCAAG TTGGAAGAAT TGGTAGAAAA GGAAGGTTGT ACAGTAGATG CCAGATTGTA CCATTTCGCT GTTGGGTTGG ATATCGCTCA AAGTCTCTAG
|
Protein sequence | MSSSHSKGSP YGAKITAIEE LDKGNWIQTR KIKYQDPHGN DRLWEMAIRT TRSETTNVDA VSIIAILEKE GRDREVVLIK QFRPPTGKVV LELPAGLIDP KESIASTAVR ELIEETGYYG TFARESVAVF SDPGLTNANM VLAYVDVDLS DPRNKNPKAE LEDGEFIEMF HLPLKGLLGK LEELVEKEGC TVDARLYHFA VGLDIAQSL
|
| |