| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_53664 |
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| Symbol | |
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| ID | 4851626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 2375409 |
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| End bp | 2375948 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | |
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| GC content | 42% |
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| IMG OID | 640393334 |
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| Product | predicted protein |
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| Protein accession | XP_001387027 |
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| Protein GI | 126275084 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2016] Predicted RNA-binding protein (contains PUA domain) |
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| TIGRFAM ID | [TIGR00451] uncharacterized domain 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.24175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0700588 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCAAGA AGTTTACTAA AGAAGACGTT CATTCTCGCT CCAACATCAA GTCTTCAGCC
CAGAGAGGCT TGAAGACCAA GTTTGTAGAC CAGTTCGAAG ACTTGGAACC TGTCATAGAC
AACATCATAC CGAAGAAATC CCAAGCCATC TTGATCAAGT GTGAAGATAA AATCCAATTG
TACTCTGTTG AAAACGAAGT AGTTTTGTTC CAGCACTTCG ACGACTTGAT CCCTACTCTC
AAGATTGTTC ATAAATACCC TCAATGCTTC CCAAGAGTCC AAGTCGACCG TGGAGCCATC
AAGTTTGTAT TGTCTGGTGC CAATATCATG TGTCCCGGTT TGACTAGTGC TGGTGCCAAA
TTGCCTGAAG AGAATTTAGA AGTCGATACC ATAGTAACCA TCTATGCTGA AGGTAAGGAA
AACGCTTTGG CTGTAGGCAA ATTGGTGATG AGCACTGATG AAATCAAATC CAAGAACAAG
GGTATTGGTA TTGAGCTTTT GCATTACTTG GGTGACGGTT TATGGACTCT TTCTGAGTGA
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| Protein sequence | MFKKFTKEDV HSRSNIKSSA QRGLKTKFVD QFEDLEPVID NIIPKKSQAI LIKCEDKIQL
YSVENEVVLF QHFDDLIPTL KIVHKYPQCF PRVQVDRGAI KFVLSGANIM CPGLTSAGAK
LPEENLEVDT IVTIYAEGKE NALAVGKLVM STDEIKSKNK GIGIELLHYL GDGLWTLSE
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