| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_53620 |
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| Symbol | MLS1.1 |
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| ID | 4851826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 2927124 |
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| End bp | 2928779 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 640393534 |
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| Product | Malate synthase, glyoxysomal (MASY) |
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| Protein accession | XP_001386893 |
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| Protein GI | 126275718 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2225] Malate synthase |
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| TIGRFAM ID | [TIGR01344] malate synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCTC CATTCCCACA AACCGTCGAC AAAGTCAAGG GCCTCAAGAT TTTGGGTCCC
CTCCCTGAAG GAGCCAAACA CATCTTCAAT GTTGAAGCTT TGGCTTTCGT TGCTACTTTG
CACCGTTCGT TCAATGCCCG TAGAAAGGAA TTGTTAGCCA ACAGAAAGGA AGCCCAGAGG
TTGAGAGACT CCGGTAAGTT GCCTGACTTT TTGCCAGAAA CTGCCTACAT CAGAGATGAT
GCCACCTGGA CCGGACCTCC ATTGGCCAAG GGCTTGCAGG ACAGAAGAGT TGAAATCACC
GGTCCTACTG ACAGAAAGAT GGTGATCAAT GCCTTGAACT CCAACGTTGC TACTTACATG
GCAGATTTCG AAGACTCGTT GACTCCAGCT TGGAACAACT TGGTCGAAGG TCAGGTTAAC
TTGTACGACG GTGTCAGAAG AAACTTGACT TTTGAAACCA ACGGCAAGAA GTACGCCTTG
AACCTTGACC CCAAGAGACA CATCCCAACC TTGATTGTCA GACCCAGAGG CTGGCACTTG
GAAGAAAAGC ATGTCACTGT GGACGGCGAG CCAGTTTCGG GTGGTATTTT TGACTTTGCC
ATCTACTTCT ACAACAACGC TGTTGAATCC TTGAAGCAGG GCTTTGGACC ATACTTCTAC
TTGCCAAAGA TGGAACACCA CTTGGAAGCC AAGTTGTGGA ATGACATCTT CAACTACTCC
CAGGACTACA TTGGTATTCC AAGAGGTACC ATCAGAGCCT CCGTTTTGAT TGAGACTTTG
CCAGCTGCCT TCCAGATGGA CGAAATCATC TACCAATTAA GACAGCACAT TGCCGGCTTG
AACTGTGGTA GATGGGACTA CATCTTCTCA TACATCAAGT CATTGAGAAA CCACCCTGAA
TTCATCTTGC CAGACAGATC CCAAGTGACT ATGGCTGCTC CATTTATGTC ATCTTACGTA
AAGTTGTTGG TGCACACATG TCATAAGAGA CAAGTACATG CCTTAGGTGG TATGGCTGCG
CAGATTCCAA TCAAGGACGA TCCAGAAAGA AACAGATTGG CTTTGGAAAA CGTTGCCAGA
GACAAGTTGA GAGAAGTGAC CACTGGTTGC GACTCCTGTT GGGTTGCTCA CCCAGCCTTG
GTTCCTGTCG TGTTGAAGGT CTTCAACGAG CACATGAAGG GTCCTAACCA GATCAATGTT
CCACCAAAGA CTCCATACAA GCCTGTTACT GCAAGAGACT TGTTGTCGCC ATTTGTTCCA
GGTGCCAAGA TCACCGAACA GGGTATCAGA GCCAACATCA TCATTGGTCT CTCGTACATT
GAAGCCTGGT TAAGAAACGT CGGCTGTGTT CCTATCAACT ACTTGATGGA AGATGCTGCC
ACTGCAGAAG TGTCTAGAAC TCAAATTTGG CAATGGGTTA CCCACGGTGC TACTACAGAC
ACCGGAGTCA CCGTCACCAA GCCTTATGTG CAAAAGTTGT TGAAGGAAGA ATACACCAAG
TTGGCCCAGG CTGCCAAGCC AGGCAACAAG TTCAAGCCAG CTTTGGCCTA CTTTGCCCCA
GAAGCTTCTG CTGACAGGTA CTCTGATTTC CTTACGACTT TGATCTACGA CGACGTCACC
ACCATCGGCA GAGCCTTGCC AGGTGAAAAA TTGTAG
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| Protein sequence | MSSPFPQTVD KVKGLKILGP LPEGAKHIFN VEALAFVATL HRSFNARRKE LLANRKEAQR
LRDSGKLPDF LPETAYIRDD ATWTGPPLAK GLQDRRVEIT GPTDRKMVIN ALNSNVATYM
ADFEDSLTPA WNNLVEGQVN LYDGVRRNLT FETNGKKYAL NLDPKRHIPT LIVRPRGWHL
EEKHVTVDGE PVSGGIFDFA IYFYNNAVES LKQGFGPYFY LPKMEHHLEA KLWNDIFNYS
QDYIGIPRGT IRASVLIETL PAAFQMDEII YQLRQHIAGL NCGRWDYIFS YIKSLRNHPE
FILPDRSQVT MAAPFMSSYV KLLVHTCHKR QVHALGGMAA QIPIKDDPER NRLALENVAR
DKLREVTTGC DSCWVAHPAL VPVVLKVFNE HMKGPNQINV PPKTPYKPVT ARDLLSPFVP
GAKITEQGIR ANIIIGLSYI EAWLRNVGCV PINYLMEDAA TAEVSRTQIW QWVTHGATTD
TGVTVTKPYV QKLLKEEYTK LAQAAKPGNK FKPALAYFAP EASADRYSDF LTTLIYDDVT
TIGRALPGEK L
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