| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_53466 |
|---|
| Symbol | PTM6 |
|---|
| ID | 4851605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | - |
|---|
| Start bp | 2307684 |
|---|
| End bp | 2309921 |
|---|
| Gene Length | 2238 bp |
|---|
| Protein Length | 745 aa |
|---|
| Translation table | |
|---|
| GC content | 38% |
|---|
| IMG OID | 640393313 |
|---|
| Product | protein mannosyltransferase |
|---|
| Protein accession | XP_001387014 |
|---|
| Protein GI | 126275012 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1928] Dolichyl-phosphate-mannose--protein O-mannosyl transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000125318 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.117145 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GAATATAGGC ATTTATCAAA TAGAAAGAAT CAAGAATCAC AAAACGAGAA AATCTTGGAA
GAAATAATTT CTAAGACAGA ATCTTTATCC ATTAGTTCTC ATGATAACCA TGCCAGTATT
TCCAGGGTCT TCACTATGTA CATAAATCCT TTGGTGTTGA CAGCCTTATC CGCATTTGTG
CGATTGTATC GTATAGATGC ATCGAATAAA GTGCTATGGG ATGAAGCTCA TTTTGGCAAG
TTTGGTTCCT ACTACTTGAA GCATGAATTC TACTTCGATG TTCACCCTCC GTTAGGAAAG
TTACTAGTTG GTTTATCTGG TTACTTGTCA GGCTATGATG GAAATTTTCT GTTTGACAGT
GGAATAGAGT ATGGTGATAA TTGCAACTAC GTAATGATGA GATGCTTCAA TTGTATGTTC
AGTATATTGT GTACCCCAAT TGCTTACAAG ACTTCCGAGT CACTTGGCTT TAGCCAATTG
ACTACCTGGT TTATTTGTTT ACTGGTTATT TTTGAGATGA TATCATTGAC ATTGTCAAAA
TTTATTCTTT TGGACTCCAT GTTACTCTTC TTTACAATGT TGGCTTTTTA CTGCTTAGTG
AATGTTCACA ATGCTAGAGT GAAGAATCGG CTACTTTCGC GACAAGGAAC AAAAGCTCTA
ATACTCACTG GATTTTCAAT TGGATGTGTG TGTTCTGTAA AGTGGGTCGG ACTATTCGTA
ACTTCTGTTA TTGGTCTCTA CATTATTTAC GATTTATTGA TTAAGTTCTA CCAACTAATA
TCTACGGACC AACTTGGACT CAAAGAATAT ATTTTTCATT GGATTTCGAG AATATTAACT
TTAATAATAT ACCCGTTTGT AATTTATTTG CTATGCTTCA AAATCCATTT CTTAGTGCTC
AACCACTCTG GTCCAGGAGA TGGGTCTATA TCCACATTAT TGCAGGCATC ATTGGAAGGA
AATAAGATTA AGCAAGGCCC ACGATCGGTT GCCTTCGACT CACTTGTTAC ACTTAGATCT
CAGGGCCTCT CCCCCAATTT ACTTCATTCA CATGATCATT CTTATCCAGA AGGTTCGCAA
TTGCAACAGA TAACAACGTA CGGCTTCAAG GACGACAATA ATGATTTCGT AATTAAAGCC
GATAAATTTC TTGAACGATC TTCAGGCGTA GTTGAAACTC TGGACACCCT ACTTAAACAT
GGAGATACAA TTAGACTCAT GCACAATAAA ACCAGATGCT TCTTACATTC TCAACCTATT
CTGGCACCAA TATCAGACAA TCACTATGAG GTATCTTGCA TATCAGAATT GGAGGTAAAT
GACTTCAGAA ATTCATGGAC AGTTGAAGTA CAGGGCCAAG AAAAGTCTGA ATCTCCTTTT
TTCCAAAGCG AGAGCGAAGA TGAAGTTCAT CCTATTTCAA CCAATTTTCG ATTAAAGCAC
AAGCAATTGG GATGCTATTT GGCTACTACA GGGTATTCAT ATCCTTCGTG GGGATTTCAG
CAGGGAGAGG TAGTCTGCAA GTATGCAATA TTATCCAGGG ACAAAACAAC TTGGTGGAAT
ATTGAAGACC ATTCCAATAA CAAGTTCGAG ACACCTTCGG AATCATATGT GCCTCCCAAA
CCTAAGTTCT GGAAAGAGTT TGTGTTGCTA AACTACGGTA TGCTTGCCTC AAATAATGCC
CTTATTCCAG ACCCAGATAA ATTTGATAGA TTGAGTTCCG AATGGTGGGA GTGGCCACTC
TTACTTTCTG GAATTAGGCT TGGCTCGTGG GGAGCAGATG ATGTTAAGTA CTTCTTAATG
GGTAATCCAT TTATAACTTG GTTCTCAACT TTCTCCTTGT TGATTTTTAT TCTTTATGTC
GCAGCATGTG CGGTGATGCA TCAAAGGCAA ATCTTATCAT ATAGTGTTCT TGGAGAGAAC
TGGAATGAAC TATTGATTCA AGGAATTTTC CCTTTTCTAG CTTGGTTTTT GCATTATTTC
CCCTTTGTCG TTATGGGACG AGTAAAGTAT CTACATCACT ATGTTCCAGC ACTATACTTC
GCCATATTAG TAAGTGCATT CGTAATGGAA ACATTCATAA GAAAGAGATT GAATCGTGTT
ATTGTATGCA CAATCTATTT GATTGCATAC ATAATGATTA TAGCATCTTT CTGGTACTTA
AAAGACTTCT CATTGGGAAT GGAGGGCCCG CCAAGCAAGT TTAAGAAGTT GAAATTTCTT
TCATCATGGA TGCTATGA
|
|---|
| Protein sequence | EYRHLSNRKN QESQNEKILE EIISKTESLS ISSHDNHASI SRVFTMYINP LVLTALSAFV
RLYRIDASNK VLWDEAHFGK FGSYYLKHEF YFDVHPPLGK LLVGLSGYLS GYDGNFLFDS
GIEYGDNCNY VMMRCFNCMF SILCTPIAYK TSESLGFSQL TTWFICLLVI FEMISLTLSK
FILLDSMLLF FTMLAFYCLV NVHNARVKNR LLSRQGTKAL ILTGFSIGCV CSVKWVGLFV
TSVIGLYIIY DLLIKFYQLI STDQLGLKEY IFHWISRILT LIIYPFVIYL LCFKIHFLVL
NHSGPGDGSI STLLQASLEG NKIKQGPRSV AFDSLVTLRS QGLSPNLLHS HDHSYPEGSQ
LQQITTYGFK DDNNDFVIKA DKFLERSSGV VETLDTLLKH GDTIRLMHNK TRCFLHSQPI
LAPISDNHYE VSCISELEVN DFRNSWTVEV QGQEKSESPF FQSESEDEVH PISTNFRLKH
KQLGCYLATT GYSYPSWGFQ QGEVVCKYAI LSRDKTTWWN IEDHSNNKFE TPSESYVPPK
PKFWKEFVLL NYGMLASNNA LIPDPDKFDR LSSEWWEWPL LLSGIRLGSW GADDVKYFLM
GNPFITWFST FSLLIFILYV AACAVMHQRQ ILSYSVLGEN WNELLIQGIF PFLAWFLHYF
PFVVMGRVKY LHHYVPALYF AILVSAFVME TFIRKRLNRV IVCTIYLIAY IMIIASFWYL
KDFSLGMEGP PSKFKKLKFL SSWML
|
|---|
| |