| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_5340 |
|---|
| Symbol | |
|---|
| ID | 4851397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | + |
|---|
| Start bp | 1708486 |
|---|
| End bp | 1709589 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | |
|---|
| GC content | 42% |
|---|
| IMG OID | 640393105 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | XP_001387555 |
|---|
| Protein GI | 126274487 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2106] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | AAGAAACCAG TCAAGACTTC CCCAAAAGTG CAAGTTTCCG TATGCATACC CTCCACAGTG
ATCTCATCGA AGAATGCTAG GAATCTTGAA CAGATAACCT CCATAGTAAA TCAGATAGCG
AGAGCTGCCA CCATATACAA TGTGGTTGAG ATTATAATAC TCGATATTCC GGAATCGGCT
GCCGAGGATG AGAACCAAAA GGTGGTTGAG CTAGGTGGTT CCAAGGGTGG AAAGAAGTTA
AAGTTCAACT TTAGTGATGA AGAAATCCTA AAAGATAAGC AAGAAACAGT AGCGCAGACT
TCGGAAGATG TACAAGACTC TTCCGCCAAT GCATTCTTAT TGGCCGGTTT ATTGCAATTT
TTTGTGACTC CTCCATACTT GGTGAAAACC ATCTTTTCCC CAGCTATCAA TCCTAGTCCT
CTCAACAAAG ACATGTTAAA GAAGTTCAAG TATGCCTACA AATTGCCCAA GATCACCACC
TTGCCATTCA TGTCTAACAA CGAAGTGTTC CGAGACTTCA AAGAAGGTTT CACAGTCCCC
AAAGAAACAC CCAAGGTGGT TTCTAAGAAA GACAAGTCGA AAAAGGTCAA GGCAGAAAAG
AAGATCTCGG TGACAAAATA TGTCAATATT GGAGAAGCTG AGTTGTTGGA ATTGAATATT
AAGAGGGAAA TTCCTGCCTA TTCGCGAGTC ACTGTAGATT TGAAGAACAA GACTATTGTG
TCGCCGCTAC AGGCATATGG AGTGATGGGC AACAAGTCTT CGTTTGGCTA CTACGTCAGA
TTCTGTAAAA AGTTCAGTTC CATTTTTACT GAGAGTTCGG CTCCAGAGGG GTACTCATCC
AGTATCTGTG TTCAAAGCGA TGACTTCTAT AGCTCTGCAG ACAAGATTGA AGACTTGAAC
AAGATCAACA AACTTGACAA GGTGGAAGCT AGCGAGTCTG GAAATAATAA CATTTTGTTG
GTGGTGGGAA GTTTCAAAGA CTTGCAGAGA AGCTTTAAGA GCGACTCCAT CGAAGGGGTC
GACTCCGTGG GACAGATGTT TGATGGCCAA TTGGAAGTTC CAAATGGAGT TAGAATCGAA
GATGCCTTGA TGATTGCATT GACT
|
|---|
| Protein sequence | KKPVKTSPKV QVSVCIPSTV ISSKNARNLE QITSIVNQIA RAATIYNVVE IIILDIPESA
AEDENQKVVE LGGSKGGKKL KFNFSDEEIL KDKQETVAQT SEDVQDSSAN AFLLAGLLQF
FVTPPYLVKT IFSPAINPSP LNKDMLKKFK YAYKLPKITT LPFMSNNEVF RDFKEGFTVP
KETPKVVSKK DKSKKVKAEK KISVTKYVNI GEAELLELNI KREIPAYSRV TVDLKNKTIV
SPLQAYGVMG NKSSFGYYVR FCKKFSSIFT ESSAPEGYSS SICVQSDDFY SSADKIEDLN
KINKLDKVEA SESGNNNILL VVGSFKDLQR SFKSDSIEGV DSVGQMFDGQ LEVPNGVRIE
DALMIALT
|
|---|
| |