| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_53344 |
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| Symbol | |
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| ID | 4851673 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 2505683 |
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| End bp | 2507053 |
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| Gene Length | 1371 bp |
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| Protein Length | 392 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 640393381 |
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| Product | predicted protein |
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| Protein accession | XP_001387052 |
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| Protein GI | 126275223 |
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| COG category | [A] RNA processing and modification |
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| COG ID | [COG5176] Splicing factor (branch point binding protein) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.388079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCTC CAACTCCCGT GGTTGACGAT TCTTTGGCCA CCAGATGGGC TGGAAAACCT
TCGAGATACA AGAAATTTGA CTCCATAAGG CTAGATACCA TCATAACAGG ACACTTGACT
CAAGAACAAG CAGACGCCTA CCAACAGTAT TTCAGAATAG AAGAAACCTC GGCCATTCTC
AGAATAGCGC AACAGCAACG AAAGCCCATT CTCGGGCTAC TTCCTTCTGG AAATCTTGAA
CAGAATCCCC ATTTCAAGCG AGAACCATCT CCTCCTCCCA AGTATGACAA TTTCGGAAAT
CGTATAAATA CCAGAGAGTT GCGCACTGTA GCAATGCTCG AGAAGGAAAG AAACTTCTTA
GTGGAAGAGG TAGCTAGTAG AATCAAAAAC TATGTGCCAC CAGCAGATTA TAGAAAACCA
GCTAAAACGG TAGAAAAGCT CTATATCCCC GTAAAGGACT ACCCGGATAT CAACTTTATG
GGTCTCTTGC TTGGACCCAG AGGTAACACC TTGAGACAGA TGCAAGAGGA GAGTGGTGCC
AGAATGCAGT TGAGAGGAAA GGGGTCGGTC AAAGATGGAA AATCGGCTAC TGATGATGAC
GATACCGGTG GAGAAATGAC GTCAACGTCG TTCTCAAATC CTACTCTAGA CTCCAACACA
GATGATATGC ATGTACTCAT AACAGCAGAT GCTCAACATA AGATCGCTAT AGCTATCAAA
TTAGCCAATG AAGTGATAGA AAAGGCCATT TCTTCACCTG TAGGACAAAA TGATTTGAAG
CGAGGACAAT TACGAGAGTT AGCTGTGTTG AACGGGACTT TAAGAGAAAC AAAGCCATAT
AACCCAGAGG CCCGTGTCCA GAGAAAAGGA TTAGATATCT CTCAAATAGT ATGCAAATCC
TGTGGAGGCA TTGGTCATTA TGCCAGAGAC TGTAAAGTTA AACCTGACAG ATATCCTCCA
GGAACTGATT CTTATACTGG AACTGCCAGA ACTTCATATC AAGAGCCATT GCAATCTCAA
GAAGTATTAC CTCCATGGAA GAAGCAAAAA GTCGAAGAAG TATTACCACC ATGGCAAAGT
GCTTCTTCGT CAGTTTCTGG TATTGCAAGC TTACCAGCTC CTCCAAAGCC TACTTCAGGA
ATTGTTCCAC CGCTACCTGT AGGAATCAAA CCTCCTGCTC CTCCACCTCC TCCAGCCACT
GGATTTCCAC CACCACCACC ACCTTCAGTT AAACCGCCAC CACCACCTTC AGCAGCAAAA
CCTCCACCTC CACCATCAGA AGTCAAAGTC CCACCTCCAC CACCAGAAGT CAAAGTCCCA
CCTCCACCAC CAGAAGTCAA AGTCCCACCT CCACCACCAC CATCTAGTTG A
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| Protein sequence | MKAPTPVVDD SLATRWAGKP SRYKKFDSIR LDTIITGHLT QEQADAYQQY FRIEETSAIL
RIAQQQRKPI LGLLPSGNLE QNPHFKREPS PPPKYDNFGN RINTRELRTV AMLEKERNFL
VEEVASRIKN YVPPADYRKP AKTVEKLYIP VKDYPDINFM GLLLGPRGNT LRQMQEESGA
RMQLRGKGSV KDGKSATDDD DTGGEMTSTS FSNPTLDSNT DDMHVLITAD AQHKIAIAIK
LANEVIEKAI SSPVGQNDLK RGQLRELAVL NGTLRETKPY NPEARVQRKG LDISQIVCKS
CGGIGHYARD CKPTSGIVPP LPVGIKPPAP PPPPATGFPP PPPPSVKPPP PPSAAKPPPP
PSEVKVPPPP PEVKVPPPPP EVKVPPPPPP SS
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