Gene PICST_53336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_53336 
SymbolRL27 
ID4851886 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp3109854 
End bp3110747 
Gene Length894 bp 
Protein Length136 aa 
Translation table 
GC content39% 
IMG OID640393594 
Product60S ribosomal protein L27 
Protein accessionXP_001386921 
Protein GI126275916 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2163] Ribosomal protein L14E/L6E/L27E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGT TCATCAAATC AGGCAAAGTT GGTATGTATC GAACTCAAGA TAGTAAGCTC 
AGGTAGAGCC GGCCCCTATG CTGTTGCACT CCTTGTATCA GAATTTCACT ATGAGATCTA
AGAATCTTCA ACGCTTCTTC AAAACCAAAT CAGAGATGAC AACAATTCAA AAGTCTGACA
ATCCCACTCT AAACAGAGGG GTAAAGTAAC ACCGATAGTA TATGCGTTTG AATCGACGAG
GATGTTTTCA ATATTCAATT ATTTTGAGAG TAAATGTCTA TGAAATACAA GCAATAGTAT
TTGAGTCTCC TAGGAATATT AAAAGTCTGA TCAACAAATA CCATAATCAT ACTTCAACAT
ATTTCAAACA AAGGCATCAA TTTGATCATT AATACGCTTT AGTAAATCTC AACGTCTCCA
TAACTTCACT ACTTTTTTCA CATTTCAAAA ATTCTGAACA ATTAAGCTCT ACCGGAAGAC
AACAAATTGT TGAATCTTTA CTAACCAAAT CTAGCTATTG TTACTCGTGG TCGTTTCGCC
GGTAAGAAGG TCGTCATCGT GAAGCCTCAC GATGAAGGTA CCAAGGCTCA CCAATTCCCA
CACGCCATTG TTGTCGGTGT CGAAAGAGCT CCTTTGAAGG TCACCAAGAA CTTGGGTGCT
AAGAAGACTG CCAAGAGAAC CAAGGTCAAG CCTTTCGTTA AGTTGGTTAA CTACAACCAC
TTGATGCCAA CCAGATACTC TTTGGATGTT GAATCCTTCA AGTCTGTTGT CACCTCCGAA
GCTTTGGAAG AACCATCCCA AAGAGAAGAA GCCAAGAAGG TTGTCAAGAA GGCCTTAGAA
GAAAAGCACC AAGCTGGTAA GAACAAGTGG TTCTTCCAAA AGTTGCACTT TTAA
 
Protein sequence
MAKFIKSGKV AIVTRGRFAG KKVVIVKPHD EGTKAHQFPH AIVVGVERAP LKVTKNLGAK 
KTAKRTKVKP FVKLVNYNHL MPTRYSLDVE SFKSVVTSEA LEEPSQREEA KKVVKKALEE
KHQAGKNKWF FQKLHF