Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_53336 |
Symbol | RL27 |
ID | 4851886 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | + |
Start bp | 3109854 |
End bp | 3110747 |
Gene Length | 894 bp |
Protein Length | 136 aa |
Translation table | |
GC content | 39% |
IMG OID | 640393594 |
Product | 60S ribosomal protein L27 |
Protein accession | XP_001386921 |
Protein GI | 126275916 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2163] Ribosomal protein L14E/L6E/L27E |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAGT TCATCAAATC AGGCAAAGTT GGTATGTATC GAACTCAAGA TAGTAAGCTC AGGTAGAGCC GGCCCCTATG CTGTTGCACT CCTTGTATCA GAATTTCACT ATGAGATCTA AGAATCTTCA ACGCTTCTTC AAAACCAAAT CAGAGATGAC AACAATTCAA AAGTCTGACA ATCCCACTCT AAACAGAGGG GTAAAGTAAC ACCGATAGTA TATGCGTTTG AATCGACGAG GATGTTTTCA ATATTCAATT ATTTTGAGAG TAAATGTCTA TGAAATACAA GCAATAGTAT TTGAGTCTCC TAGGAATATT AAAAGTCTGA TCAACAAATA CCATAATCAT ACTTCAACAT ATTTCAAACA AAGGCATCAA TTTGATCATT AATACGCTTT AGTAAATCTC AACGTCTCCA TAACTTCACT ACTTTTTTCA CATTTCAAAA ATTCTGAACA ATTAAGCTCT ACCGGAAGAC AACAAATTGT TGAATCTTTA CTAACCAAAT CTAGCTATTG TTACTCGTGG TCGTTTCGCC GGTAAGAAGG TCGTCATCGT GAAGCCTCAC GATGAAGGTA CCAAGGCTCA CCAATTCCCA CACGCCATTG TTGTCGGTGT CGAAAGAGCT CCTTTGAAGG TCACCAAGAA CTTGGGTGCT AAGAAGACTG CCAAGAGAAC CAAGGTCAAG CCTTTCGTTA AGTTGGTTAA CTACAACCAC TTGATGCCAA CCAGATACTC TTTGGATGTT GAATCCTTCA AGTCTGTTGT CACCTCCGAA GCTTTGGAAG AACCATCCCA AAGAGAAGAA GCCAAGAAGG TTGTCAAGAA GGCCTTAGAA GAAAAGCACC AAGCTGGTAA GAACAAGTGG TTCTTCCAAA AGTTGCACTT TTAA
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Protein sequence | MAKFIKSGKV AIVTRGRFAG KKVVIVKPHD EGTKAHQFPH AIVVGVERAP LKVTKNLGAK KTAKRTKVKP FVKLVNYNHL MPTRYSLDVE SFKSVVTSEA LEEPSQREEA KKVVKKALEE KHQAGKNKWF FQKLHF
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