| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_53245 |
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| Symbol | |
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| ID | 4851842 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 2980794 |
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| End bp | 2985587 |
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| Gene Length | 4794 bp |
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| Protein Length | 1584 aa |
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| Translation table | |
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| GC content | 38% |
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| IMG OID | 640393550 |
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| Product | predicted protein |
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| Protein accession | XP_001387136 |
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| Protein GI | 126275762 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0312861 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACG TCCAACAGCT CACTGTAGGT CTTTCAAACC TTGCATCGGA GTCCAAGAGG
AGATACACGG ACGTAAGGCA TGGCTGCGAT ACAGCACTAG CTGATTGTAA ATTGTACCAG
CCTAATAAAT CGATCCATGA TATCACCAAT GAACAGCACA GGCAGCATAT AATAGCACCC
TTTGTAGCGT CGTGCCGGAC AGGTAACGCC AAGATTGCCA CCATAGCCAT TCCCACTATA
CACAAATTGA TCATGGCAGG TGTAGTGCCA CTGGGTAGTT TAGGAAGTTT GGTAGATTCG
TTGATGGAAG CTTCGCATCT AGCAGTGGAT ATTCAGTTGA GAATTCTCCA GAGTCTTCCC
TCATTGATGC AAAATTACAC GAAAGAATTT ACAGGCGAAT TGCTTGTCAA GCTACTTGCG
TTGTGTTCGA GTTTGACCAC CAACAACAAG TCAACTGTGG TTATCAATAC TGCATCAGCT
ACTTTGCAAC AGCTCTTCAG TAATGTGTTT GATAAATACA AAGAGCACAC AGAGGAGACT
GAAAGAAACT TGGAAATCAC CATTGACAAT AATGAGATTA TTAAAGTAGA CGCTATTGCC
CTTGAAGGGT TCAGCGTCTT CCAGGATATC ACTCATGCCA TAGAAAACGA AAAGCAAACT
TATCTTAATG ACACAATCCA TATGAAAGTC ACTTCGGCTT TAGAAATCAT AGAGAATATT
TTGACGAACC ACAAGGAAAC ATTCCATTCG CATCAAGAAT TGGCGTATTT GCTCAGAGTG
AAAGTCATAC CTTCTTTGCT CAGAATTCTA AACTCACCAC ACAAGAACTT TCCTCTTATC
ACAAGAACTA TGAGAGTTAT CCATGTACTA TTGGCTACAC AATTAAAAAA CTTGGAGATT
GAGAGTGAAA TTGTTTTGTC ATTTTTAAAC CATATTCTTC TCAACAACGA AGGTGGCGCA
AAAGTAGTCA ACTGGGAAAA GATTCTCGTC TTGGAAATGT TCAAATCGCT TTTCACAGAT
TTCAGAGTAT TAAAATCCAT CTATGAGACT TACGACAATA GCTCTCGTAA GAAGAACGTT
ATCCACGAGC TTGTATCCAT ATTAAGCACA TTTTTACTGT ACAATTCGTA TCTTTTCAAC
GATATAGTGA AACCACTTCC AAAGTTTCCC ACTCGTTCTG ATTTAAGTTC AGCTCCTACT
CTGCATGATG GCGCTTATCC TATATACCTT TCGAAGGTGC TGTCAACCAT GAAAGTTGCT
ATTATTGACC ACTTGGATAA ATCTGAACCC CCATTGGCTA TACCCCAAAC TTATCCAGTC
TTTCTCATAT ACAACATTCT CTTAGCATAT GCTGATGGTA TTGCCAAATT TGTGCAATCG
TTATCAGATA ATTCCGATAC CAACAATCTT GAGGCTGATG TAGAATTCAC AAACGCCTTC
ATCGAATCTT GTTTCACAGA AATCTCTGCT TTGTTTGAGA AGTTTATCTA CACTCTGATG
GATGATGATG CTTTCCATTT GCTTGTCAGA TCTTTACAGA GATACACACA TACTACTGGC
CTTTTGGGCC TTGGTAAATT GAGAGATAAA CTCTTGATCA TTATTTCTAC GTCTGTAACG
AGAAATACTT TAAATGAGGA AACAAACAAT GGAAGCTCTT CTGGATTCAG TGAGCAAGGA
AAGCAGTTGT TTGCATTCGG GGAATCGTTA GTAGAATCAT TCGGTGCCAC ATTGCAACCC
CATATTGGTG ATGGTAATAG CAACAATGCC CAACCAGTTC AACTTAGATC TAGATACTTC
AACTCAAGAC ATGTGACATG TTTGAGAGCA TTGGCTAATC TTGCAGTTTC TTTAGGTTCT
ACCTTGCAAG ACTCATGGAA GATTATCTGG AAGACTTTTC AATGGTGTGA TTATTTCCTT
TATGGTCCTG ATGAATATAG CGGATATTAC AACCATAAAC TGTACAAGAA CTTTACTGAT
TCGATGTTAC CACAGTTGTC TACTTCGGAT ATTAGCAATT ACGATTTTTC AAGGAGGAAG
ATGTTCGACA GTCTTAGCGA ATATCCTGCT GAGTCATTCC AACGGTTGTT GGAGGCATTG
ATTCAGCTTT CAGAGTTGCT GTTTGAAGTG GAAGAGGATT CTCAAGAAGT AGAACTCAAT
GAAAAGTCAA ACGAAAGTAA TGAATCTATT GACGATGATT TAGAAGTGTG TCCATACAAC
AAAACATTTT ACTTGTTGAA GGTTTTGAGC TTCGCAGAAA ATGACTCAAA TCAGTATCTC
ATCAAGTTTG ACAAACCGTG GGACTCTTTT TGCAAATATT TTATCAAGTT GGGAACAAGA
AGAGATTTGA ATTACAATCT TCGTATTTTC ATTATCACTA CCTTTAATGA TATTGTGAAA
TCTGTAGCAG ACCAAGGGTT CAAGTCAGCT GACGAAATTA CTATAAGACA AACTTCGGAA
AAATCTCTAG GGGCATTGAA TAATTATCTT GTTGCGATGT TCGAATTAGG AATCCCACAA
GAGCTTTTGG TTTTGAATTG TGAGACTGAG CTTCATCTTT TGACTTTAAC AACGTTGCAT
GAATTGATAG ATAAATACGA CACTTATTAT CAGAGTTCGT GGCATACGGT ATTCACTATT
ATAAATACCC CGTTCAAGAC TGTTGGCTCA CTCAGCGAGG ACAATAATTT GAAAGAAAAG
AACCGTTTAT TGATTGAAAA GTCATTTGAT ACTTTGAAAT TGATTTTGGA TGAGTTTATG
TCTTCCTTGC CTTACGACCA ATTGAAGCTT CTAATTGATA CTCTTCATAA CTTTTGTTCT
CAGCATTACG ATTTGAACAT TTCCTTCAGT TCAGTTAGTT ACTTTTGGAT GATCAGTGAC
TCCTTGAAGT CGCGAATTTC AATTGTTACC GAAATGAACC GTGATGAATT AAACAAAGAA
CAAGAGAAGT TGACGAACAT CAGTGAGCTC ACAGCTTACA TTGATACTCA TGATTCGAAA
GAGTCATATC TATTCTATAT ATTAGTTGAT GATTACTTAT TGTCAACTTT GGTTAAACTT
TCCTTCGATG ATAGAGCTCA AGTTAGAGAT GGATCCATCC AGACCTTTTT CCAAATTATA
GATGTTCATG GTGCCCTTTT GACAGCGTCG ATGTCGTGGG ACTTGTTTTA CAGAATTGTT
CTTCCCGATT TGTTGAGTGT TAAAGTAATA AATAGTGCCA ACATTGGAGA TTGGGTCGAG
AGCTTGAATT TGATCCTTTC AGGGGTGATT GCGCTCTACG GAAAATTTAT GATGGACTTT
AACGAAATTC CCAAGGTTCA TGAAAAATGG GAAAGGTTAA TTCAATATTT CAATGACTTG
CTAGATTTGA AAAGTATTGA ATTGAACTTG AAAGTGTTCG GTTCCTTTCA AGATCTTTTG
ATTTCGTTTA GAAATGTTGA TATTTCAAAG ATTCATGAAT TCAATAGAAT TCGTACTTTG
TTGTTCAAAT TTTGGGTGGG AATTCCGATT GAGTATGACT TTGTCAATGT TTCATACCAG
GAGTCCGTAA CTTCACTTAT GGATTGTTTT CCAGCACTTT ACAATTTAAT AGCCGGCCAG
CTCACGTTAG AAGAAGTCAA TACCATTTTG ACTGTTTTGA ACAAATGCGC TAGGAATCCT
GTTTTACCGA CTTCATATTT GGATAATGTC AGGCCTTCCA AGTTGCAAAG TTCTGTGATT
AAGAATTTGA CAATTATTTC AAGTTCTGAT CCAAAGATTC AGTCTCAAGT CATTCAACAG
CTCAGTAATA TCTTGGTGTA TCCATTTGGT ATTAGGTCTA CTATCGAACT GAAATTAAGT
AGCAATAAGT TGATCACAAA CAAGTTTAAG ATTCCGACGT TCATAGCCAT AAGTCATATT
TCAATCAAGT TATTGAAGAC TAAATTGAAG GAATTGGCTG ACTCCAAAGT CTTGGTCGAA
GACAAGGGTA TAATCAAGGT GTTGAAGTCA TTGCTAGAGA TTATTAGTTC AAAGTCTGTT
GGTATTGAAA CTGAAGAACA GGCACTCTGG ATTGAAGCTA GCGAGATTCT TAAGGATCTA
GTAGAGCAAC TTATCAAAGA CAAGAATGTT GGAGGAGACA AGGAGTTGTG GAGATTGATC
ATCAACGCAG TGAAATTATG TTACGAGTAC AAGGACCAAG GGGCTATTTT TGAAGATTTC
AACATCAAGC AATACCAAGA ATTGAGCCGC ATGATATTGC CAACTTTGCT CGAAGACAGC
CAGCATCAGG AGTTGATCAG TGATTGGATC GAAAGCATTT ACCGTAACTC GTATCTTTAT
GAGTTTGATG AGTTGGAAAC TTCTATCATG GCGGAAAATG AATCTACGGA AGATTTGGTC
ACACACTTTC TGAACTTTGA CTTTGATGGC TCATTTGGGT CCACAAAGCC GCTTGTCAAG
CATCGTAATA AGATTACGAG ATTCAATTGT TTGACGGAAT TGATTCGATT CTGTCAGGAT
CCAGTCAATG AACAGTTGAA TGTCACCAGT CAATACTACT TTGCTTGCCG TGCTTCATTA
TGTCTTCGTA GATTTATCAG CGACGCAAAA CTATTGAACA GATGTCCTAT AGCTAAAGTT
CAAGAGGAGG AGCTTATACT TGTGTTGAAT GGGTTAGCGG ATATCAAGAG CGTCACGCAA
GAGAATAGAG ATAACTTGCG AAAGTTGTAT CCGTTAGTGG TAAAGTTGGT TCCCTTCACA
TCGAGAATCA GCGGACTAGA CGTTTTGGTG GAAAAAGTTT TACATAGATT TTAG
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| Protein sequence | MSNVQQLTVG LSNLASESKR RYTDVRHGCD TALADCKLYQ PNKSIHDITN EQHRQHIIAP
FVASCRTGNA KIATIAIPTI HKLIMAGVVP LGSLGSLVDS LMEASHLAVD IQLRILQSLP
SLMQNYTKEF TGELLVKLLA LCSSLTTNNK STVVINTASA TLQQLFSNVF DKYKEHTEET
ERNLEITIDN NEIIKVDAIA LEGFSVFQDI THAIENEKQT YLNDTIHMKV TSALEIIENI
LTNHKETFHS HQELAYLLRV KVIPSLLRIL NSPHKNFPLI TRTMRVIHVL LATQLKNLEI
ESEIVLSFLN HILLNNEGGA KVVNWEKILV LEMFKSLFTD FRVLKSIYET YDNSSRKKNV
IHELVSILST FLLYNSYLFN DIVKPLPKFP TRSDLSSAPT LHDGAYPIYL SKVLSTMKVA
IIDHLDKSEP PLAIPQTYPV FLIYNILLAY ADGIAKFVQS LSDNSDTNNL EADVEFTNAF
IESCFTEISA LFEKFIYTLM DDDAFHLLVR SLQRYTHTTG LLGLGKLRDK LLIIISTSVT
RNTLNEETNN GSSSGFSEQG KQLFAFGESL VESFGATLQP HIGDGNSNNA QPVQLRSRYF
NSRHVTCLRA LANLAVSLGS TLQDSWKIIW KTFQWCDYFL YGPDEYSGYY NHKLYKNFTD
SMLPQLSTSD ISNYDFSRRK MFDSLSEYPA ESFQRLLEAL IQLSELLFES NESNESIDDD
LEVCPYNKTF YLLKVLSFAE NDSNQYLIKF DKPWDSFCKY FIKLGTRRDL NYNLRIFIIT
TFNDIVKSVA DQGFKSADEI TIRQTSEKSL GALNNYLVAM FELGIPQELL VLNCETELHL
LTLTTLHELI DKYDTYYQSS WHTVFTIINT PFKTVGSLSE DNNLKEKNRL LIEKSFDTLK
LILDEFMSSL PYDQLKLLID TLHNFCSQHY DLNISFSSVS YFWMISDSLK SRISIVTEMN
RDELNKEQEK LTNISELTAY IDTHDSKESY LFYILVDDYL LSTLVKLSFD DRAQVRDGSI
QTFFQIIDVH GALLTASMSW DLFYRIVLPD LLSVKVINSA NIGDWVESLN LILSGVIALY
GKFMMDFNEI PKVHEKWERL IQYFNDLLDL KSIELNLKVF GSFQDLLISF RNVDISKIHE
FNRIRTLLFK FWVGIPIEYD FVNVSYQESV TSLMDCFPAL YNLIAGQLTL EEVNTILTVL
NKCARNPVLP TSYLDNVRPS KLQSSVIKNL TIISSSDPKI QSQVIQQLSN ILVYPFGIRS
TIELKLSSNK LITNKFKIPT FIAISHISIK LLKTKLKELA DSKVLVEDKG IIKVLKSLLE
IISSKSVGIE TEEQALWIEA SEILKDLVEQ LIKDKNVGGD KELWRLIINA VKLCYEYKDQ
GAIFEDFNIK QYQELSRMIL PTLLEDSQHQ ELISDWIESI YRNSYLYEFD ELETSIMAEN
ESTEDLVTHF LNFDFDGSFG STKPLVKHRN KITRFNCLTE LIRFCQDPVN EQLNVTSQYY
FACRASLCLR RFISDAKLLN RCPIAKVQEE ELILVLNGLA DIKSVTQENR DNLRKLYPLV
VKLVPFTSRI SGLDVLVEKV LHRF
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