Gene PICST_53208 details

Gene Information

• Locus tag: PICST_53208
• ID: 4851754
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Scheffersomyces stipitis CBS 6054
• Kingdom: Eukaryota
• Replicon accession: NC_009068
• Strand: +
• Start bp: 2748112
• End bp: 2751543
• Gene Length: 3432 bp
• Protein Length: 1143 aa
• GC content: 39%
• IMG OID: 640393462
• Product: predicted protein
• Protein accession: XP_001386857
• Protein GI: 126275500

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.691313
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCTTCAT TAAACACGGC TGAGGCTGTG ACCAAATTCT TGCGGTCAAA AACTGCCACT 
ATCGACCAAA TCATAGAAAC ATGCCTTTCC CTTCTTGATA ATAGTACAGT TAACCAAGTA 
TATCTTCCCA ACAAATGTAC TTTTATTCTT GAGTTGCTTA GTGACCGGTT GAATGACTGG 
AGTAATGGCC CGTTCAAACT GTGGAAATAC AATAGTTCAA TCTGGCGTTT GCTAACAAAA 
GTATGGGTTC TGTTAGCTTC GGAAGCTTCA AGCAAGACTT CGAGAAACAA AATATTTAAG 
AAAGTAAAGC TAGTTGATAT CATTATAGAC ATATTGTCCA ATGCTCCGGA TCAGGAATTG 
CTTCTGGAGC TCATGAATTT TGTTTCTTTG GCCAGAGAGG GCACTTATAT CGAAATCGAT 
GAGAATAACT CTATGAACAT GCTTAGCTCA TTCTCCAATT GTAGTACTTT GCTCACAGCT 
AACGATTCGG ATATCGCCAG ATGGGTCTCA CTCGTTAGAG ACTTGTACCA ATTGCCTCGT 
CTTACGGTCA GCTTTTCACC TTCTAAAAAG TACTACAAGA AGTTCATCAC TACTTGTTCA 
CCTAATCTAT TGCATTTCAT CGTCATATAT GGCACAAAGG GCTACAGTTC CATATTCAGA 
GATATCCTTG TCAAAGAGCT CTTCTTCGGC GAGTTGGTTT CCAACTTTGT TTCTGATATT 
GCCAGCGTCT TGAAAGATGA CAAGATTCTA TTGGAATCGA GTTCTGTTCA GTTATTGTTC 
AAACTCGCTG TAGAATTCGT AGCCTCGAAG GACTCAGCAT TGTGTGAAGA ACTTTTCACA 
ACCATCATTG GTATCCCCAG ATTCTCCTCC TTGTCTGAAA CACTACTTTC CATTCTAGCC 
TCTGCTAATA AATCACTTTC TAGTAAGTTT TTCCTAGCAA TTTATGAGTC GGAATTCACA 
AAACAGAAGC AACAGATCAA CTGGAATCTC ACAAACTACT TGCTAGAACT TGACATAGAC 
TTGGCGATGC AGAAATGTGA AGAAGTCGTT ACTAAGGCTC CCAAAAGCTC CCGAGAATCT 
ATCGGTGTTT CTATCCTTGA AGCCTATGTT AAGGCTAGAG AATTGCCCGA TTTCATAGAG 
TCGATTTGGC CACGGGCAAT TAAAGTTGAT CTCATTTATG CCCAGTCCTC TTTTATCAAT 
GAAGTTTCCA AAAATATCAA GATCTTGTCA TCTAAACAAT TGGGTCTTCT CATTTCCGAT 
ATTTCGAACC TAGACGATGC GATTCAGGTT CCGTTGTTAA CAGCCATATC GAAGGGTTTA 
CTTAGCTGCC CTGTGTCTAC TCAGGATACC TTGAAACAAA CACTTCTAGG AAGTAAGAAC 
TATTACATGA CCTCCAAGAA TACCAGATGG GAAATTTTGT TCTACTTGCT TTGTTTGTAT 
GGAAGAAATG TCGACGTCCC AATTGAGTCG TTGAAGAGCG ATACCACTCT TTACTATTAT 
TATTGCATCT TACGTCTTCT TGAATTGGGA AAGGATTTTC CGGATATGAA TTCATTTCTG 
AAATCATTTG CTTCTCTTCT TTTGAGTAAT CCAGAGTTGC TGAGAGTGGT TTTGAAGAGA 
TGGTTAGTTG TTATTGACTA CTATTTTCCC AAGCCTCAAA TCGACTCTAT AATTGCATCT 
CTTGTAAGAC ACCTTCATGA ATTTGGTGAG TTGTTGACAC CAGTATTTTT TGAATGTCGC 
AAGTTACCAA AATCATTAAT TAATTATTGC ATTGACAATG TCGATACCGC CATCGAATTG 
ACTACCCTAA TTCCTATCTA CTGTTTTGAC AGAACTTCTA AGAAGAAGCT ACTTGAAATC 
TTCTTGGAAC AAACAGGCAA GACCATAAAC GAAGATAAGC AAACAAAGAT CAGACTTGCC 
ATCAAACATT TGCTTGAGCA GCCTACTTTC ACTTCTACGA TCGAAACTGA TTTCAGAAAA 
GCATTAAATT TGTTTAGAGT TTCCAATTCC AATTCATTGC AAATTGCTCA AGACATCTTT 
AGTATCATTT GGAAGAACCA CTTGAATCAA ATATCCAGCA AGCAGAATGA AGCCGACGTT 
GTGGATACTG TAAAGTACTT AACGAAGTAT TTCTCTTCCA AAAAGTTCAA AGGAATTGAT 
GCTGAATTCA GTGCTGCTGA AATCATCATT ATGAATATCA AGAAATATGA TCAGATAGAG 
TCCAGTTTAC TTGTCCATTG TGAAACCTTG AGGACCTACT TTTCCAATGC TGTCATATCA 
TCGTTGAAGC AGCAGTTAAG CAAGATGAAT ATTGACGTGG TTAGTAGACT TTTGAGGTTT 
TTGGAATTAT CTGGCGACGA ATCTTCTGAT GATGTATTAA AAATTGTAAA GGAAATTGGT 
CTGAAGATTG AAAATGATGA TGATGACTCA TTAAGAGAGG TAAGGCTAGC ACTCTTCACC 
TTGCTTTCTT CCAGACTCGA GCATACGTTT GAAAACTCAG TATACATTTT CTCCTTGTAC 
ATTGCACTTC AAGACGGTTT CAATGTGGAT GCTTCTTTGG CGTTAGATTC CTATTTGCAA 
GTCTTATCAT CCAATTATGC TCAATTCTTG AAGTGCTACA TCTATGTCCT TGGATCTCTT 
GAAGAAGCAC ACGATGAACA TTGTGATGGC TTGCTGAAAT TGATCCTCTT GATGGTTAAA 
TATTTGCAAA AGAGTCATCT AGAAGAGAGT AAAAAAGCTT TCACAAGAAC TATTCTGAGT 
ATTAGCACCA AGATTGGCTA TATCCACGCG GATGTTGCTG GCATGATCTT AGTTTCTCTC 
AAGAATAGTC TCAGTGAGAC TGCCTGGTTG TTTAGCCAGT ACCTGCTTGA AATGGTATTT 
TCGTTGACGA ATCTGATTGT CCTTCTGGAG AATGGCAACA ATGCTAACAA CTACATTCTT 
GCTACCCAAG TCATTTCTCA TGTGTTATTG TTCCATAGGT ATAAGCTCAC TTCTCGTCAT 
CATATCGTCA TTAACACCTT TAATGTGTTG ATGAGAAAGT TAAGTATGAA CAAGTCGGAT 
TTGGCATTGT CTGATAGCGA AGAAGCTGCT GCATCCTATT CAAGATTGAT TGCCAACTTG 
TGTGAGCCTT CGAAGCTAGT TGTTTCGAGA GAAGTGGCCA ATGAGAAGCT TACTACGGCT 
ACGTCGTTGA TCAAGAAGTC TCTCAGAAAG CATGTACCTA TGTTGTTGAT CAATTATATT 
TACCTCAACC TTCGGGTCAA CTTCAAGAGC AACGTTAATG ACCAGTTGAT GTCTGGAATC 
TACAGCATAT TCGACGTACT CTCACAGAGC GAGCTTCAAT TGGTGAGTTT GTCTCTCGAT 
ATTCCTGGAA AATCGTACTA CAGAACATTA TATAATAACT ACAAGGACCA CGGAAAGTGG 
AAAGATACAT AA 

 

Protein sequence

MSSLNTAEAV TKFLRSKTAT IDQIIETCLS LLDNSTVNQV YLPNKCTFIL ELLSDRLNDW 
SNGPFKLWKY NSSIWRLLTK VWVLLASEAS SKTSRNKIFK KVKLVDIIID ILSNAPDQEL 
LLELMNFVSL AREGTYIEID ENNSMNMLSS FSNCSTLLTA NDSDIARWVS LVRDLYQLPR 
LTVSFSPSKK YYKKFITTCS PNLLHFIVIY GTKGYSSIFR DILVKELFFG ELVSNFVSDI 
ASVLKDDKIL LESSSVQLLF KLAVEFVASK DSALCEELFT TIIGIPRFSS LSETLLSILA 
SANKSLSSKF FLAIYESEFT KQKQQINWNL TNYLLELDID LAMQKCEEVV TKAPKSSRES 
IGVSILEAYV KARELPDFIE SIWPRAIKVD LIYAQSSFIN EVSKNIKILS SKQLGLLISD 
ISNLDDAIQV PLLTAISKGL LSCPVSTQDT LKQTLLGSKN YYMTSKNTRW EILFYLLCLY 
GRNVDVPIES LKSDTTLYYY YCILRLLELG KDFPDMNSFL KSFASLLLSN PELLRVVLKR 
WLVVIDYYFP KPQIDSIIAS LVRHLHEFGE LLTPVFFECR KLPKSLINYC IDNVDTAIEL 
TTLIPIYCFD RTSKKKLLEI FLEQTGKTIN EDKQTKIRLA IKHLLEQPTF TSTIETDFRK 
ALNLFRVSNS NSLQIAQDIF SIIWKNHLNQ ISSKQNEADV VDTVKYLTKY FSSKKFKGID 
AEFSAAEIII MNIKKYDQIE SSLLVHCETL RTYFSNAVIS SLKQQLSKMN IDVVSRLLRF 
LELSGDESSD DVLKIVKEIG LKIENDDDDS LREVRLALFT LLSSRLEHTF ENSVYIFSLY 
IALQDGFNVD ASLALDSYLQ VLSSNYAQFL KCYIYVLGSL EEAHDEHCDG LLKLILLMVK 
YLQKSHLEES KKAFTRTILS ISTKIGYIHA DVAGMILVSL KNSLSETAWL FSQYLLEMVF 
SLTNLIVLLE NGNNANNYIL ATQVISHVLL FHRYKLTSRH HIVINTFNVL MRKLSMNKSD 
LALSDSEEAA ASYSRLIANL CEPSKLVVSR EVANEKLTTA TSLIKKSLRK HVPMLLINYI 
YLNLRVNFKS NVNDQLMSGI YSIFDVLSQS ELQLVSLSLD IPGKSYYRTL YNNYKDHGKW 
KDT