Gene PICST_53150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_53150 
Symbol 
ID4851761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp2766014 
End bp2767399 
Gene Length1386 bp 
Protein Length461 aa 
Translation table 
GC content45% 
IMG OID640393469 
Productpredicted protein 
Protein accessionXP_001386861 
Protein GI126275522 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.854998 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GACGTTCATG AGTGGTCCAG AAAGATTCGA GCACAAGGAA AAGAAGTTCC GGCTGATGTG 
ACTTTGTATG AGTCAATTAC CCGTAAAGAC GGTCAGTTTT TGGCTAATTT AGGAGCTAAA
GCGCAAGAGA ATAAAGAGCT TGTAGACAAT TTGAAGAAGG ACATTCAATC GTACAACACG
ATTAAACAGT TGCGTATGAC TGCTATCAAT GCCTCCAACA AGGGACAGTT TAACAACTCT
ATCTGGGGAG AAGGATACCA GGGCTACGGC AATGGCATCA CGAATACTTC TACGAAACTA
TTGCTTCCCG AGCGTGATTT GACCGATAAG GACATCAACA CGAAGGTTCT CAGAAATAGC
AAGAAACCCA AAAACTATGT TCCTATTAGG TTGGAGTTCG ATCAGGAACG TGATCGTTTC
AAGTTGAGAG ATACATTTTT GTGGGATTTA AATGAAGAAG TGCTATCGGT TGAAGCTTTC
ACGCGACAAT TGATAGAAGA CTACAAGTTT GTATCGAAAC AGCACTACGA CACGATACTA
TCATCCATCA AAGACCAGAT CAACGATTAT CAAAAGAGAC CTCTCAAGAC TATGGGAGAG
CTCCGTGTGC CTATCAAGCT AGACATCACC ATCAACAACA CCCAGTTGAC AGACCAGTTC
GAGTGGGATG TGCTAAACTA CGAGGACAAT GATCCTGAAG ATTTTGCCAT CTACATGTGT
GACGAATTGA ATCTTCCAGG AGAGTTTACT ACTGCCATTG CTCACACCAT TAGAGAGCAG
ACACAGTTGT ATCACAAGGC ATTGACGTTG ATAGGATACG CTTTTGACGG TACTCCTGTC
CATGAGGATG AGATCAGAAG CCATCTTTTG CCATCGTTGC GCTTGGTAGC TCCTGGTTTA
TCTGTGGTCG ATGATTTCTT TTCCATCTTG AGGAACCCTT CGAACGTTGC CGACTACACT
CCTTCGCTCA TCAAGTTGAC CCAGCTTGAA GTAGAGAGGC AGGAGAAGGA AATCGAGCGA
GATTCGCGCC GTAAGAGAAG ACATAATGAG CTGGAATTGC AGGCCAGTTC TACATCTAGA
ACCATCACTT CTAGAAGAAT CGCCGCCCAT GCTGCAAGAG GTGGCCCTGT ACTTCCCGAC
TTGTCTGATC TCCCCAAGAC TTTCCGCACA CCTGCTCCTT CGAGTATATT GCCTGGTGCA
GTGGACTTGG GAGTACCTGA TGTATTTGAG TACAACGAGA TCTACGTCAA CAAAACACAG
GTTAAAAACC CAGACTATGT GCCCCCACCT CGTCCACCGA AACCTACGGT TGTACAGAAC
AACAGAGTCA GGTATTTGCA CGATGTCAAC CTGAACCGCC TTGTAGTGAC AATCCGGTTG
TCGTAG
 
Protein sequence
DVHEWSRKIR AQGKEVPADV TLYESITRKD GQFLANLGAK AQENKELVDN LKKDIQSYNT 
IKQLRMTAIN ASNKGQFNNS IWGEGYQGYG NGITNTSTKL LLPERDLTDK DINTKVLRNS
KKPKNYVPIR LEFDQERDRF KLRDTFLWDL NEEVLSVEAF TRQLIEDYKF VSKQHYDTIL
SSIKDQINDY QKRPLKTMGE LRVPIKLDIT INNTQLTDQF EWDVLNYEDN DPEDFAIYMC
DELNLPGEFT TAIAHTIREQ TQLYHKALTL IGYAFDGTPV HEDEIRSHLL PSLRLVAPGL
SVVDDFFSIL RNPSNVADYT PSLIKLTQLE VERQEKEIER DSRRKRRHNE LELQASSTSR
TITSRRIAAH AARGGPVLPD LSDLPKTFRT PAPSSILPGA VDLGVPDVFE YNEIYVNKTQ
VKNPDYVPPP RPPKPTVVQN NRVRYLHDVN LNRLVVTIRL S