| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_53028 |
|---|
| Symbol | POS5 |
|---|
| ID | 4851779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | + |
|---|
| Start bp | 2806150 |
|---|
| End bp | 2807430 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | 640393487 |
|---|
| Product | protein involved in oxidative stress |
|---|
| Protein accession | XP_001386875 |
|---|
| Protein GI | 126275577 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0061] Predicted sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAACT TAATAGACAT AAGACTGGTT ACCCAGCTTG GCAATGCCAA ATTCCCAGAG
TATGTGCAAC AGTCCCATTC CAAGTTGCAC AACGTCATCT GGAGAACACC GCTTCAAAAC
ATATACGTAG TAAAAAAACC ATGGAATTAC CACGTCCGTG ATGCAATGGT ACAGTTCATT
GACCACATCC ACCACCATTA CCCAGCAGTA AACGTCATAG TCAACGAAGA CGTAGCAGAC
GAGTTGGTCC ACGAGTTCAG TTCGGGGGGT TGCAACGACT TGGATAAATC AACAAAACAT
ATCTTGTACA CGGGAAAATT TGGCGACATC GTAGACAAAA CAGACTTGGT GGTGACGTTA
GGTGGCGATG GTACGATTCT ACGTGCTGTG AGTACTTTCC TGAATGTGAC CGTTCCTCCC
GTTCTAAGTT TTGCTTTGGG AACGTTGGGG TTCCTTTTGC CGTTTGACTT CAAGAAGGCC
AGCGACACGT TCCGTATGGT CTATGAGTCG CGAGCCAAGG CACTTCATAG AAACAGACTC
GAGTGTCATG TAGTACGTAA GAATACTCTG TCTGAGGATG ATTTCACTCC TGCCTCCAGT
AGCAGCAGCA GTGCCAGTAA CATAAGACGA TTCCAGTTGG ACCATTATAA ACACCAGGGA
CAGGTTGCCA CCATGGTGCA TGCTATGAAT GATATCTCGT TGCATAGAGG AAGTCAGCCC
AACTTGACGT CGTTGGATAT CTACATCGAC AACGAGTTCT TGACTACTAC CACGGCAGAC
GGTATTGTCT TTCTGACTCC TACAGGTTCT ACAGCGTACT CGCTTAGTGC TGGTGGCTCT
ATCACTCATC CGTTGGTTCC GTGCATATTG CTTACGCCCA TCTGTCCTAG ATCGTTGTCG
TTCAGGCCAT TGATCTTGCC TCTGACATGC CATATCATGA TCCGATTGTC AGAACTCAAC
CGGAACTCGT CTATTGAGTT GACCATCGAT GGAATCCCAC AGAGAGACTT ACTTCCCGGA
GACTCTATAC ATGTAGTCAG CGAAAAAGGT ACCATATATG TGCCTGGCCA ACACGAGCCA
CCTACCACTC TCAGCAGACG TCTAGATGTA TTGGAGGGAA ACCTGGTTCC AGAGACTGAG
GAGGAAGATA CCAACACCGC GAACACCAAT AGTAAGGGCA TCTGGTGCAT AGCCCGCAGC
GAGCACGATT GGACGAAGGA CATCAACGAG TTGTTGGGAT TCAACTCGTC GTTCCAGGGC
AAGAAGCAGT ACCATATGTA G
|
|---|
| Protein sequence | MANLIDIRLV TQLGNAKFPE YVQQSHSKLH NVIWRTPLQN IYVVKKPWNY HVRDAMVQFI
DHIHHHYPAV NVIVNEDVAD ELVHEFSSGG CNDLDKSTKH ILYTGKFGDI VDKTDLVVTL
GGDGTILRAV STFLNVTVPP VLSFALGTLG FLLPFDFKKA SDTFRMVYES RAKALHRNRL
ECHVLDHYKH QGQVATMVHA MNDISLHRGS QPNLTSLDIY IDNEFLTTTT ADGIVFLTPT
GSTAYSLSAG GSITHPLVPC ILLTPICPRS LSFRPLILPL TCHIMIRLSE LNRNSSIELT
IDGIPQRDLL PGDSIHVVSE KGTIYVPGQH EPPTTLSRHT NTANTNSKGI WCIARSEHDW
TKDINELLGF NSSFQGKKQY HM
|
|---|
| |