| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_52982 |
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| Symbol | FMT1 |
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| ID | 4851609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 2328085 |
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| End bp | 2329131 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | |
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| GC content | 39% |
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| IMG OID | 640393317 |
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| Product | methionyl-tRNA transformylase |
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| Protein accession | XP_001387016 |
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| Protein GI | 126275026 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.235194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.398719 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | CCTCTAAATA TTGCTTTCTT TGGAAGTGAT TCTTTTAGCG TGCAATCGTT AGATAGACTT
TACAGGTACA AATTGCAACA CCCAGAGAGA ATTCTGTCCA TCAAGGTTGT CACCAGAACC
ATCAAGCCTA CTGGAAGGAA TCTAAAAGCT TATGTGGATC TACCAATTGG TGACTACTGT
AAGAAATTAG AGGAAAGTTT GAATAGCATT CCTGTGTTAC GAGCTGATTC CACAGAGGAT
ATACTAAGCA TTTTGAATTC AAATACATTC TCGTTGGCAA TTGCAGTTTC ATATGGAAAG
CTTATACCCG CAAAGTTTTT GGAGTCCTGC GAATTCGGAG GTCTCAATGT CCATCCTTCA
TTGCTTCCTA AATATTCTGG TTCTTCGCCG ATTCAGTATA CTTTGCTTAA TGACGATAGA
ACGGCTGGTT GCACAGTACA GACCCTTCAT CCAACGAAGT TCGATCAAGG TAATATAATT
TTGCAATCAA AAGAAATACC TGTTTCAAAT AAAGATAACT TTGAGAGCTT GCAAATTCGT
TTGGGGGCCA TCGGAAGTGA TCTCTTGGTT CAAGTTATAG ACGAAGGTCT ATTCATGGAA
AATTGTTCGC CCCATCTTCG AAGTGAGAAT AAGTACGCGT TTTCGCTTGC TCCCAAAATA
CGTCCATCAA GCTCTGAGAT AAAATGGTCA ATCAAATCTT CGTTGCAGAT AAAACGGATG
GAAGATGCAT TGGGCCCATT GCATTCTTAC AAATTTGTGA ACTTGAAGAG AAAGAAAAAG
GTAATACAGG AGAACCAGAG GGTTATTCTT TCTGATATTG AGGTTATTAA ATGTGGATAT
TACCCTTCGA TTTCCAAGCC TGGTCAATTT TGTCTTGAGG ATTCGAGTAA TCCCCGTTTG
ATTATAAAAA CCGTAGATGG TCATATTGGC GTTAGAAAAC TAAAATTTCA AGCTTGCAAG
GAAGAGGTAC CAGAAGTTTT TCTTAAAGCA TTGGCAAAGA GATCTGGAGA CACTCCTCAT
CAATTTGATG CTACATGTTT CAACTAA
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| Protein sequence | PLNIAFFGSD SFSVQSLDRL YRYKLQHPER ILSIKVVTRT IKPTGRNLKA YVDLPIGDYC
KKLEESLNSI PVLRADSTED ILSILNSNTF SLAIAVSYGK LIPAKFLESC EFGGLNVHPS
LLPKYSGSSP IQYTLLNDDR TAGCTVQTLH PTKFDQGNII LQSKEIPVSN KDNFESLQIR
LGAIGSDLLV QVIDEGLFME NCSPHLRSEN KYAFSLAPKI RPSSSEIKWS IKSSLQIKRM
EDALGPLHSY KFVNLKRKKK VIQENQRVIL SDIEVIKCGY YPSISKPGQF CLEDSSNPRL
IIKTVDGHIG VRKLKFQACK EEVPEVFLKA LAKRSGDTPH QFDATCFN
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