| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_52971 |
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| Symbol | CDC16 |
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| ID | 4850927 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 466106 |
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| End bp | 468232 |
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| Gene Length | 2127 bp |
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| Protein Length | 698 aa |
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| Translation table | |
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| GC content | 44% |
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| IMG OID | 640392635 |
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| Product | anaphase-promoting complex component |
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| Protein accession | XP_001387328 |
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| Protein GI | 126273888 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCAGA ACCAGAAAAC ACCATCGCAG CACAATTCGA CGTTGTTCAT CTCGCCGATG
ATCAACAGCC GTCGGCAGAA TCTTTTTGTA ACTCCTCCAA ATCCAGCAGC ACAGACTTTG
TTTGATAGTC CTGGGTCGAA TCGGTCTCTG TTTTTCAATC TTGAGCGAGG CAACGTTAAT
GACGATACTA CTTCGAACTC CAACATACCA CCTGCTGCTG GTCCAGCAAA TGGAAGAATG
GCGAATGTAG AACCGCTTAC ACCAGCCGAA AAACTTCGGT TGTGGAGACA TGATGCCTTG
ATGCAACATC AATATAAGAC AGCCGAGTTC ATCGGTGACA AAGTTCTTGC ACTCACAGAC
GATCCCAATG ATGCGTTCTG GTTGGCACAA GTATACTTCA ACAGCGGGAA TTATCTTCGG
GCCAAGCTGT TGCTTACCAG CAAGCCGGAA TTCGAGAAGT CGGTTAGTTG TAGGTATCTT
GCTGCATACT GCTTGATCAA GCTAGAGTTA TGGGACGAGG CTCTTGATCT TGTTGGCGAA
AGTAACCCAT TCCGTAAAGA CGACAAGTAT CAAGTCCGCA GCACTGATGG TGGGATCAAG
CTTGAGGCTT CTATTTGCTA TTTGAGAGGT CTCATCTATG CCAACCAGAA TAACTTTGAA
AAAGCTAAGG AGTCATATAA AGAAGCTATC CTAGTAGATG TAAAATGCTA TGAAGCATTC
ACGGAATTGA TCAGCAACAA CTTGATGACA CCCAGAGAAG AATGGGATTT CATCACGACG
TTAAATTACC GGGATGCAGA TGATAACGAT GAGCTCATCA AATTGCTCTA CACATCTCGC
TTGAGCAAGT ACCTCAATGT ATCCAAGCTT TACGAGGCAG AACATATCTT GACAGAAGAG
TACGACTTGG GAGACAATTG TGACATTCTC TTGAGCAAAG CCGACTACCT ATACGTACAG
TGTAATTTCG ACGAGTGCCT CTCGATATGT GAACAGATAT TACGGAAGGA CCAGTACAAC
TTCGACATTA TTCCGAATTA TCTAAGTTGT TTGCACGAGC TAGGAGGCAA GAACAAGTTG
TTCTTAAAAG CGCACCAGTT GGCAGAAAAC CACCCTACCA ACCCCATGAC ATGGTTGGCC
ATAGGGACGT ACTACTTATC AATTAGTAAG ATAGCTGAGG CCAGAAAGTT TTTCAGCAAA
GCAACGCTCT TGAATCCCAA CTTTGGGCAG GCTTGGATCG GATTTGCACA CACTTTTGCA
GCCGAAGGAG AACACGAACA AGCCATCAGC GCCTATGCTT TTGCAGCCAG ACTCTTTCCT
GGAACACATT TGCCCAACCT CTTTCTTGGG ATGCAACATT TGCAAATGAA CAACCTCAAC
TTATCGGAAG AGTATCTTGC GGCATCGTAC CAGATTTGCA ATTCGGATCC GTTGCTCTTG
AACGAGTTGG GAGTCATCAA TTTCCACAAG AATAATTTCG CCAAGGCAGA AATGTTTTTC
CAGGAAGCTT TGGGAGCTGC CAAGTACTTG AATTCTGATT CCAAGACTTG GATATCTATA
CATGCCAACT TGGGTCACGT CTACAGAAGA GGTAACCAAC CAAATAAAGC ATTACAATGT
TTCAACCAAG TTCTAAAAAT AAGCAACAAG AACGACTCCA ATATCTTGGC TGCTATAGGA
TTAATCAACT TGAAGTTGGG AAATTACTTC AAGGCTATAG ATGTCTTGCA CGATGCCCTT
GCTATCTCAC CTTCTGACCC CGTAGCATCA GATTTGTTAC GAAGAGCATT GGAGTCCAAC
AAAAACAACG GAAACTCGTT CATCAGAAGT AATGGAGAAA AATTGCTTGA GCTCAACTTG
CCAACACTTC AATATAGACA GAAACAGAGC AGGAAAGATG GCCTGCTTCA AGGTCAACAG
ACGGTGGTTA GTGCTCAGAA CAGTAAATTT ATGACCCCGT TAACTAACAA GACTAGAATA
CTAAGAAAAG GCTCTGGTGT GCTTCAGCCC ATTGAAAAGG ATACTGACGA TACCCACGAA
GCTTTCTACA TTGCTCATGA ACTCAAAAAA GGAAATGAAT CTAGCGACGA AGACGATGAA
GCTATTATGG ACATTGAGAG CGATTAG
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| Protein sequence | MVQNQKTPSQ HNSTLFISPM INSRRQNLFV TPPNPAAQTL FDSPGSNRSL FFNLERGNVN
DDTTSNSNIP PAAEPLTPAE KLRLWRHDAL MQHQYKTAEF IGDKVLALTD DPNDAFWLAQ
VYFNSGNYLR AKLLLTSKPE FEKSVSCRYL AAYCLIKLEL WDEALDLVGE SNPFRKDDKY
QVRSTDGGIK LEASICYLRG LIYANQNNFE KAKESYKEAI LVDVKCYEAF TELISNNLMT
PREEWDFITT LNYRDADDND ELIKLLYTSR LSKYLNVSKL YEAEHILTEE YDLGDNCDIL
LSKADYLYVQ CNFDECLSIC EQILRKDQYN FDIIPNYLSC LHELGGKNKL FLKAHQLAEN
HPTNPMTWLA IGTYYLSISK IAEARKFFSK ATLLNPNFGQ AWIGFAHTFA AEGEHEQAIS
AYAFAARLFP GTHLPNLFLG MQHLQMNNLN LSEEYLAASY QICNSDPLLL NELGVINFHK
NNFAKAEMFF QEALGAAKYL NSDSKTWISI HANLGHVYRR GNQPNKALQC FNQVLKISNK
NDSNILAAIG LINLKLGNYF KAIDVLHDAL AISPSDPVAS DLLRRALESN KNNGNSFIRS
NGEKLLELNL PTLQYRQKQS RKDGLLQGQQ TVVSAQNSKF MTPLTNKTRI LRKGSGVLQP
IEKDTDDTHE AFYIAHELKK GNESSDEDDE AIMDIESD
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