| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_52941 |
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| Symbol | FAL1 |
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| ID | 4851152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 1059236 |
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| End bp | 1060435 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640392860 |
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| Product | RNA helicase involved in maturation of 18S rRNA |
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| Protein accession | XP_001387431 |
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| Protein GI | 126274138 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0572699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.201544 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGATT TCGACAGAGA TTTGGACAAC GAATTGGAGT TCTCCCACAA GTCCACTAAG
AATGTTAAGG TGCATGCGAC TTTTGAAAGC ATGAACCTCA AGCCAGACCT CTTAAAAGGC
ATATATGGCT ATGGTTTTGA GGCTCCTTCA GCTATTCAGT CCCGTGCCAT CATGCAGATC
ATTAACGGGA GAGATACTAT TGCCCAGGCT CAATCGGGAA CTGGGAAAAC AGCCACTTTC
TCCATAGGAA TGCTCCAAGC CATAGATACT AATGCCAAAG ACTGTCAGGC GCTAATTCTT
TCCCCAACTA GAGAGTTGGC AGTTCAGATT CAGAACGTCG TTAAACATTT AGGTGACTAC
ATGAACATCC ACACACATGC TTGTATAGGA GGAACGCATG TGGGCGATGA CATCAAGAAG
TTGAAACAGG GCCAACAGAT TGTGAGTGGA ACTCCAGGTA GAGTCGTGGA TATGGTCAAG
AGACAGCAAT TATCCACTAG AAATATCAAG ATGTTGATTT TGGACGAAGC TGACGAATTA
TTCACCAAAG GTTTCAAAGA ACAAATCTAC GAAGTTTATA AGTACTTGCC CCCTTCAGTC
CAGGTGGTTG TAGTTAGTGC AACTCTTTCA CGAGAAGTGT TGGAAATGAC CAACAAGTTC
ACCACAGACC CTGTCAAGAT TTTGGTGAAG CGAGACCAGA TCACTCTTGA AGGTATTAAA
CAGTATCATG TTCAGTGTGA GAAAGAAGAC TGGAAGTTTG ATACGTTGTG TGATTTGTAC
GACAACTTGA CCATCACCCA GGCCGTGATC TTCTGTAACA CCAAGCTCAA AGTCAACTGG
CTCACTGACC AGATGAGAAA GCAGAACTTT ACTGTTGTGT CTATGCATGG TGACATGAAA
CAGGACGAAC GTGACTCCAT CATGAACGAT TTCAGAACGG GAAACTCCCG TGTGTTGATT
TCCACCGATG TGTGGGCCAG AGGAATTGAT GTGCAACAAG TTTCGCTCGT GATAAACTAC
GATTTGCCCA CTGATAAAGA GAATTATATA CACAGAATCG GTAGATCCGG AAGATTTGGA
AGAAAGGGGG TAGCCATCAA TTTGATCACT AAGGAGGATG TTGCTACGTT GAGAGACTTT
GAGAAGTATT ACTCGACGAA GATCAGAGAA ATGCCCATGA ACATTAACGA TATAATGTAG
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| Protein sequence | MDDFDRDLDN ELEFSHKSTK NVKVHATFES MNLKPDLLKG IYGYGFEAPS AIQSRAIMQI
INGRDTIAQA QSGTGKTATF SIGMLQAIDT NAKDCQALIL SPTRELAVQI QNVVKHLGDY
MNIHTHACIG GTHVGDDIKK LKQGQQIVSG TPGRVVDMVK RQQLSTRNIK MLILDEADEL
FTKGFKEQIY EVYKYLPPSV QVVVVSATLS REVLEMTNKF TTDPVKILVK RDQITLEGIK
QYHVQCEKED WKFDTLCDLY DNLTITQAVI FCNTKLKVNW LTDQMRKQNF TVVSMHGDMK
QDERDSIMND FRTGNSRVLI STDVWARGID VQQVSLVINY DLPTDKENYI HRIGRSGRFG
RKGVAINLIT KEDVATLRDF EKYYSTKIRE MPMNINDIM
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