| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_52735 |
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| Symbol | STB6 |
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| ID | 4851186 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 1146639 |
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| End bp | 1148855 |
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| Gene Length | 2217 bp |
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| Protein Length | 591 aa |
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| Translation table | |
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| GC content | 38% |
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| IMG OID | 640392894 |
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| Product | SIN3 binding protein |
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| Protein accession | XP_001387449 |
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| Protein GI | 126274172 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0582833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0303882 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTTT ACTACCGCAA GCTGATGGGC AATGGCACTG TTGCCAGCAA GTTCCGCTTG
AACAGCATCC AGCTCAATCA GTCCAACATG CGTGTTCACC AGAAAGAGCC TTCTATTAGC
AAGAGTCAGA GCCAGATACC AGAAAATGAC AATAGACAGA TACGAAACCA ACATTCAAAT
GTCTCGAGAC AAGAAAAGGT CGCAGAAAAC AAAGCCGCTA ATAACTCGAA TGTAGAAAGA
ACGCAGGAAT CCAAAACGGA CTATGTCTCC AGTTCGTCCT CATTGAGCTC TTCTCCAAAA
CCTAGAAATC CAAGTGTTAG TGCTGAAATA ACTAATGTTG GTAACAAAAA CAGCAGCAGC
AATATTAAAG GCAAATCTAT TGACTCTAAT GTCAACGTTA CGAATGGAGA TGCTACTGCT
AAGATTGCTA CTGATTCAAA TAAATACGAA TCAAACCTAC ATACCTTCTA CAACAATAAT
CAAAACCAAC AGCCTTCAGA AATCACTTCA AAAATGGCTC TGGAGCCAGC AGATAATTAT
CCCATAGAAA GTCCCGAAAC TCACCACCCC AGCAATTGTA TTCGTTGCTA TCGGTTGAAG
AAAAAGTGTT CCAGACAGTA TCCCAAATGT TCTACATGTA CCAAAGGGCA TTTTGACTGT
GAATACGTAA CTAGGTCTAA CAAACGTAAA CGCAGGAAAA AGGCGGATTT GAATAATCTC
GAGAACACTA TTGATTTAAC TCAAAACAGT GACATCGAAA ATCAGAATGA AATCGAACCT
GATCTTGTAG AACATAGCAA CGCTCCTTCG TCTACGATTT TCCATATAGA AGCTACGGGA
AAAGATGGTA ATGTAGATAA ACTGGTTGTG GCACATAAAT TAGTATCTGT ATCGTCTCTT
CTTACCGACG AAACTCCAGA TCCTTCAAAA TTGGTCTCTA CTCATGAATC ATCTCGACCT
AGAAAAGTTC CCTCAGCTGC CCTTTCAAGT ATGGCCAGAA GAACAAGAGA ACACAACGAA
TCACTAGCGG AAAAACTGAC TAAGAAGCTC TTCCATCCTC TAAAGACAAA CCTCAATGAT
GATTTCATCA CCGTATTACC CATGAAGAAC TATATCTCCG CCACATTTGT ATACAATTAC
TTTGAGAATT TTGGCTCCAA ATACCCTTTC GTTAACAAGG AAGAATTCAT GCAGCGATTT
GTAAAGATCG ACTTTAACAA GGAGGCTATC GTCAACTTGG ATATTTATAT GGTAATGAGC
ATTGGCTGTA TCATATATGA TTCATATAGC AATGTGCTGC TTTTCGACAA ATTCTTCAAG
GAATCCATAA TAGAGTCTAT TGTGGACGGA TTAGATTTTA CCTTTAACGG ACAAAATAGC
GAGAAAGAAG AACTTCAAAA CTTGGAATTA ATAACCCTCC TCACAATCTA CAGTATTGCG
TCTTTGAACA AACAGAATTG CTGGGCTCTT GTGGGAGTTT TGAATAGATT GGCCCTTCAA
TTGGATCTAT ACAAAGCAAC GGACAATGTG CGAAAACAGA GACTTTTCTG GTCTATCCAC
AATATCGAGA TGGAATTGAG CTTGTTGCTA AACAAGCCCG CACAGACTCC TCAAGATAAG
TTTATCACTT TAGACTACCC ATTGAAAAAT AAGTATTTTA AATGCGAAGA AGAGGTGCTA
CTTTCACATG AGATATGGTA TGCCAAAATC CAAGAGAAGA TTCTTGTATT GCAATTGTCT
AACGATGATG ACAAACAGAA ATTGGTGACA TTGTCCTCTG AGATTGAGAA GTGGAGAGTT
GGTATAAGTG GAGTGGTTCA TCGAGTATAT AGAGAATCGC TGCTCTTGAA GAACTATACC
GACTTGATCA ATTTAAATTA CTACTATTTG CTTGTGGAGC TAGATCAACT TTCTCCTAAC
AAATCCTTCC AATTCACATT ACAATTTGTT TCCAACTCGT TTTCAATTCT TACTTCAAAT
GCAGAAGTTG AAATCGACAA CGAAGACCAA AACTCAGGTT CTAAAAAACC AGTAGTACGT
TTGTCTTTGG CGTCATCCTT ATTTTGGTAC AAGAAACTAT TTAAAGTCGT CAGGTTCAAC
ATGGATTCCT TAAGCAGGAT GATTGCTTCT ACAACAACAG TCAAGTTTGA CTTTGGAATC
AAATTGAACG AATTCAGAAG TAATATTCTG TTGATAACCA ACCTCTTGAA ATATGTC
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| Protein sequence | MDFYYRKLMG NGTVASKFRL NSIQLNQSNM QKVAENKAAN NSNVERTQES KTDYPADNYP
IESPETHHPS NCIRCYRLKK KCSRQYPKCS TCTKGHFDCE YVTRSNKRKR RKKADLNNLE
NTIDLTQNKA TGKDGNVDKL VVAHKLVSVS SLLTDETPDP SKLVSTHESS RPRKVPSAAL
SSMARRTREH NESLAEKLTK KLFHPLKTNL NDDFITVLPM KNYISATFVY NYFENFGSKY
PFVNKEEFMQ RFVKIDFNKE AIVNLDIYMV MSIGCIIYDS YSNVLLFDKF FKESIIESIV
DGLDFTFNGQ NSEKEELQNL ELITLLTIYS IASLNKQNCW ALVGVLNRLA LQLDLYKATD
NVRKQRLFWS IHNIEMELSL LLNKPAQTPQ DKFITLDYPL KNKYFKCEEE VLLSHEIWYA
KIQEKILVLQ LSNDDDKQKL VTLSSEIEKW RVGISGVVHR VYRESLLLKN YTDLINLNYY
YLLVELDQLS PNKSFQFTLQ FVSNSFSILT SNAEVEIDNE DQNSGSKKPV VRLSLASSLF
WYKKLFKVVR FNMDSLSRMI ASTTTVKFDF GIKLNEFRSN ILLITNLLKY V
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