| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_52700 |
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| Symbol | GPT1 |
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| ID | 4851208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 1199569 |
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| End bp | 1201182 |
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| Gene Length | 1614 bp |
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| Protein Length | 538 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 640392916 |
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| Product | GABA/polyamine transporter |
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| Protein accession | XP_001387459 |
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| Protein GI | 126274194 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0113876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATCAGTCCAG TGGTTTCCGA GGTCCATGTG GATGCCTTGA GAATTACTTC GATGCTCTCC
AACAAAGATA TTACTATTCA GGTATCTCAT GAGGTTGACG ATGATGAAGC CATGATTTTG
GCTATGGGTT ACAAGCAGGA GTTCAAGAGA GAATTCGGAG CATTTTCGGT TTTTGCCGTG
TCGTTCTCTG TGCTTGGGTT GCTTCCTTCT ATCGCTGCCT GTTTTGATTA CCAGCAGTTG
GTTATTGGTA TTTCTCCCAT TCCATGGCTC ATTGCCGTGT TCTTTGTCAC ATCAGTTGCT
CTTTCTTTGG CTGAAGTAGC TTCTGCTTTT CCAGTTTCTA CTGGTACTCC CTATGCTGTT
TCACAGTTGG CTCCTAAGAA ATGGGCTCCA TACTTAACTT GGATCACCTG TTGGTCCAAC
TGGTTGTGCC AAATCACTGC TTCTCCTTCC GTAAACTGGT CTGGTGCCTC GTTGATGTTT
GCCTTGGGTA CCTTCACTAA CCCCAACTTT GTCCCAACTA CTGGTCAAGT CTATGGTTTG
ACTACAGGTA TCCAAGTTGT TCATGCTATC ATCTCTTCGT TACCTACAAA ATACTTGGCT
ACCTTTAACT CTATGGGTAC AACTTGTAAT ATGTTGTTCT TGGTCATTGT GTTCGTGATG
ATCCTCGCGG CCAACGATAG AGACAACATG TACAACGGAG ACATCCCCAA GTTCAATACA
AACGGTGTAG CCTGGTCTTT GTATAACCAA ACTGAGTGGC CCCAAGGTAT CGCCATGTTG
ATGTCCTTCT TGGGTGTCAT CTGGTCTATG AGTGGTTACG ATTCCCCTTT CCATCTTGCT
GAGGAATGTT CCAACGCCGC TGTGGCTGCT CCTAGAGCCA TCTTCTTGAC TTCTTCAGTA
GGTGGCCTTA TTGGTTTCAT TTTCATGGTT GCTATTGCAT ACACTGTAGT TGACATTGAT
CTCATTGCTG AGGATCCTCA GGGGTTGGGA CAACCATTCG TTTCTTATCT TACTCAAATA
ATGGGCAAAA ACACCGTTAT CGCTGCTACA GCTTTGACAA TTGTATCGTC CTTCTTCATG
GGTTGTTCTT GTATGTTGGC TGCTTCCAGA GTAACATGGG CCTACTCTCG TGATAACATG
TTCCCAGGTT CCAGATGGTG GAAAAAGGTG GCTCCAATCA CCCAAACCCC CATCAATGCC
GTGTGGGTTA ACTTTTTCAT CGGTCAATTG TGTCTCTTGC TTATGTTTGC TGGTGATGTA
GCCATCGGTG CCATTTTCTC TGTTGGTGGT ATTGCTGGTT TTGTTTCCTT CACAATGCCA
ACTCTTTTGA AAATCACATA CGCCAGAAAT ACTTTCAAGC CTGGCCCATG GAACTTGGGT
CGTTTCTCTA CTCCAATCGG TTTTGTATCG GTAGCCTTCG TCGCTCTTAT GATTCCTATC
TTATGCTTCC CATACGTCCG TGGTGCCGAC TTGACTCTCG ACCAGGTCAA CTGGACCCTG
TTGGTATTTT TTGGTCCTCT TCTTTTGGCC ACTATCTGGT GGGTTGTTGA CGCTCACAAG
TGGTACATTG GTCCAAAGAG TAATCTTGAC CAAGACCACA TTCTCTACGG AGAG
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| Protein sequence | ISPVVSEVHV DALRITSMLS NKDITIQVSH EVDDDEAMIL AMGYKQEFKR EFGAFSVFAV
SFSVLGLLPS IAACFDYQQL VIGISPIPWL IAVFFVTSVA LSLAEVASAF PVSTGTPYAV
SQLAPKKWAP YLTWITCWSN WLCQITASPS VNWSGASLMF ALGTFTNPNF VPTTGQVYGL
TTGIQVVHAI ISSLPTKYLA TFNSMGTTCN MLFLVIVFVM ILAANDRDNM YNGDIPKFNT
NGVAWSLYNQ TEWPQGIAML MSFLGVIWSM SGYDSPFHLA EECSNAAVAA PRAIFLTSSV
GGLIGFIFMV AIAYTVVDID LIAEDPQGLG QPFVSYLTQI MGKNTVIAAT ALTIVSSFFM
GCSCMLAASR VTWAYSRDNM FPGSRWWKKV APITQTPINA VWVNFFIGQL CLLLMFAGDV
AIGAIFSVGG IAGFVSFTMP TLLKITYARN TFKPGPWNLG RFSTPIGFVS VAFVALMIPI
LCFPYVRGAD LTLDQVNWTL LVFFGPLLLA TIWWVVDAHK WYIGPKSNLD QDHILYGE
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