Gene PICST_52466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_52466 
SymbolFEN4 
ID4851267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp1352833 
End bp1354575 
Gene Length1743 bp 
Protein Length580 aa 
Translation table 
GC content41% 
IMG OID640392975 
Productputative permease, Suppressor of sulfoxyde ethionine Resistance Vitamin H transporter (H+/biotin symporter) 
Protein accessionXP_001387907 
Protein GI126274253 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.766269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.465437 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTACA TAGGCACTGT AATTGGACGT ATGAAATGGG GATTTCTCCC TGTCAGGCGG 
ATCGTTGACG AAGACGAGAA CGGTAACTTT ATTGTGCCTG ACGAGGATAA GCTTTCGCTA
GATTCCGAAA CTAATTCAGA AAAGAATAGT ATCAACGAAG AGACTCGTGA CGTTGAACTG
TCCTTGGAAT ACAGAGATGA AAAGAACCGT AAATGGTACA ATTTCTTTAA CGAATACGAA
TATCGTGTGA CAAGCAAGGT CAAACAAAGA CGTAAATGGT ACAAATGGTT TCATGACGAT
GATACTCCAG AAGAACGCCG TGTTATCATG AAGATTGACC TTCTTCTTAC TTTTTACTCG
TTGATGGCCT ACTGGGTTAA ATATTTGGAT CAAACTAATC TTACCAATGC GTATGTTGGT
GGTTTACGTG AATCTATTAA CATGCAAGGC AATGACTTTG TTAACACTCA AGTGATGTTC
TCCGTTGGTA ACATTGTTTT TCAAATTCCG TTCATGTACA TCCTTTATGC ACTTCCTATG
AACTACGTTC TTCCTATGTT GGATCTTTGC TGGTCAATCT TGACAATTTC CTTGTACAGG
GTCGAAAACG TTGCTACATT GAAAGTGCTC AGATTCTTCA TTGGTAGTTT TGAATCGTGT
GCTTATATTG CATACCATGC CTTATTCGCC TCTTGGTTTA AGGGAAGTAC TGCTGAGATT
ACGAGAAGAG CTGGTTTCTA TTATCTCGGT CAGTACTTGG GTATCTTGAC TTCCGGTTTA
CTTTCCGGTG CTATCATGAG GACTATGGGT GGAATTGGTG GACTTGAACC ATGGCAATGG
ATTTTTATCA TGGATGGTAT TATTTCTGTG ATTGTTGGTA TCTTGGGTTT CTACATGATT
CCAGGTACCC CTCAAGATTG CTACTCTCCA TTCTTGAGTG ATGATGATAT ACGAATTGCC
AGACGTCGTA TGATTAAGGA TCAGAAGAAC TACAAACCAA GAGAAAATGC TGTAAAGCAC
TTCTTCAATT TGGACATTTG GAAATCTATA TTCAGCTCAT GGCACATTTA TGTGTTGTCT
TTGTGGAATA TATTCTGTTG GAACAACAGT AATGGTTCTT CTGGTTCTTA TGCATTGTGG
TTGAAATCGT TAACAAAGTC TGATGGTGTA ACCCCAAGAT TCAGTCCAGG GCAGCTTCAA
GATTACACTG CTTTGACTCC TGCTCTTGGT CTCCTTTGGT TGATTTTGAC TTGTAGTTTT
GCTGATCTTT TCAATACTCG TTGGGGTGCC ATATTGTTTT CTCAAGTATT CAATGTTCTT
GGAAACCTTA TTTTGGCAGT TTGGGACGTT CCAGAGAAGG CAAAGTGGTT TGCATTTTGT
CTCCAATACT TTGGATGGGC CATGGCTCCA GTCTTGTACT CGTGGCAAGG TGACATCTGT
CGTAAAGATA TTCGTGAAAG ACAGGTTGTT TTGGTTACCA TGAACATTCT TGCTCAACAA
TCAACTGCTT GGATTGCTGT TTTGGTATGG CCAACGGTGG AAGCGCCAAG ATTTATCAAG
GGGTTCTCGT TCACAGCTGC CAGTGGTGTC GCTCTTTCTA TTTGGACTTT GGTAGTCTTG
TGGTTCTACA AGAGAGAGGA AAGACAGAAT GCTAGAGAAA ACGGAATTAT CTTATACAAC
TCTGATGTCG ATTCTGAGAT CCAGCCCCAG GAAGTTTCGG AATTCGTAGA TGAGAAGAAG
TGA
 
Protein sequence
MSYIGTVIGR MKWGFLPVRR IVDEDENGNF IVPDEDKLSL DSETNSEKNS INEETRDVEL 
SLEYRDEKNR KWYNFFNEYE YRVTSKVKQR RKWYKWFHDD DTPEERRVIM KIDLLLTFYS
LMAYWVKYLD QTNLTNAYVG GLRESINMQG NDFVNTQVMF SVGNIVFQIP FMYILYALPM
NYVLPMLDLC WSILTISLYR VENVATLKVL RFFIGSFESC AYIAYHALFA SWFKGSTAEI
TRRAGFYYLG QYLGILTSGL LSGAIMRTMG GIGGLEPWQW IFIMDGIISV IVGILGFYMI
PGTPQDCYSP FLSDDDIRIA RRRMIKDQKN YKPRENAVKH FFNLDIWKSI FSSWHIYVLS
LWNIFCWNNS NGSSGSYALW LKSLTKSDGV TPRFSPGQLQ DYTALTPALG LLWLILTCSF
ADLFNTRWGA ILFSQVFNVL GNLILAVWDV PEKAKWFAFC LQYFGWAMAP VLYSWQGDIC
RKDIRERQVV LVTMNILAQQ STAWIAVLVW PTVEAPRFIK GFSFTAASGV ALSIWTLVVL
WFYKREERQN ARENGIILYN SDVDSEIQPQ EVSEFVDEKK