| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_52358 |
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| Symbol | AGP3 |
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| ID | 4851100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 928154 |
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| End bp | 929617 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 640392808 |
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| Product | amino acid permease |
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| Protein accession | XP_001387411 |
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| Protein GI | 126274086 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0833] Amino acid transporters |
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| TIGRFAM ID | [TIGR00913] amino acid permease (yeast) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.676257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GATAACCATA CCCATCTCAA ACGGACATTG AAAGACCGCC ACATTTCGCT TATTGCACTT
GCTGGTATTA TTGGTCCTGG TATTCTTATA GGTGCGTCCT TGGCCTTGGC TAATGGACCA
GCATCGTTGA TTATTGGCTT TGGAGTAATT GGTTTGATAG CGTTTGCTAT GATGCAGTCT
TTGGGTGAAT TAGCTACCCT TTACCCTACT GGAGGTACTT TTTCCACTTT GGGCAACCGA
CTTGTGGATC CAGCGTATGG AGCTGCCGTA GGATGGAACT ATGTAATTAT CTGGGTGGCT
GTTTTGGCCA ATGAGTACAA CACTGTAGCT GCTATCATGC AATTCTGGGG TCCCCAGGTT
CCATTATACG GTTATATTTT GATATTCTGG TTCTTTTTCC TTGGCTTTCA ATTTTTGGGT
GTCCAGGCAT TCGGAGAGGC AGAATTTTGG CTTGCTCTCA CGAAAATCGT TGGCCTTGTA
GCTTTCTACA TTTTCTCCAT TATTTACGTA GCTGGAGGTA TCCATGGACA AAAGGCATTT
GGTTTCCACT ACTGGAACGA CCCAGGTGCT TTTGGTGATG GTTTTAAGGG AGTTGCAAAC
ACCTTTGTCT TTGCATCCAC TTTCTATAGT GGAACAGAAA TCGTAGCTGT TTCAGCAGCA
GAAGCTGCTA ACCCTTCCAG AGCTGTTCCT CTGGCTATCA GACAGACGTT CTGGAGAATC
TTGATTATCT ACATGGGTAT TGCTGTCAGT TACGGTTTGA CTGTTCCTTA TAACGATCCT
TCGTTGAGCG CAGGTACCAA GGTTCTTAAG TCGCCAATGA CTATTGCCAT CGCTCGTGCT
GGTTGGGCAG GAGGTGCTCA TTTAATCAAT GCGTTCATCT TGCTCACATG TGTTTCTGCC
ATTAACAGTT CTATTTACAT CGGTTCTCGT ACCATAGTCA ACTTGGCTAA TGAGGGTGCA
GCTCCTAAAT TCTTCAGAAG AGTCAATAAG ACAGGAGTTC CGTACGCTGC AGTGATTCTT
ATGAATTTAT TCGGGTTCCT CTCGCTCATG AACATCAGTA CAGGAGCTGC CAAAGCTTAT
GGCTACATCG TCAACTTGTC AGGTGTCGCT GTTTTTATTG TATGGGGAAA CGTCTGTTTC
TACCATATAA GATTCAGACA AGCCTGGAAG CTTCAGGGCC GTTCTGTTTC CGAGTTGCCC
TACAAGGGAT TATGGTATCC TATCTTACCT ATTTTTGGAA TAGTCTTGAA CGTCTTTTTG
GCGTTGGTGC AAGGATGGTC GTACTTCAAG CCGTTTGATG CTGGTAATTT CGTAGATGCC
TACGTTCTTT TGCCTTTCTT CGGCTTGCTC TACGTCTTCT TCAAGCTCGT CAACCGTACG
AAGTGGGTAA ATTTGCTGGA AGTGGATTTG GACGAGGGCC GTAGAAAGGA TGTCAGGGAC
CATGTAACAA GTGGGGAAGA ATAG
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| Protein sequence | DNHTHLKRTL KDRHISLIAL AGIIGPGILI GASLALANGP ASLIIGFGVI GLIAFAMMQS
LGELATLYPT GGTFSTLGNR LVDPAYGAAV GWNYVIIWVA VLANEYNTVA AIMQFWGPQV
PLYGYILIFW FFFLGFQFLG VQAFGEAEFW LALTKIVGLV AFYIFSIIYV AGGIHGQKAF
GFHYWNDPGA FGDGFKGVAN TFVFASTFYS GTEIVAVSAA EAANPSRAVP LAIRQTFWRI
LIIYMGIAVS YGLTVPYNDP SLSAGTKVLK SPMTIAIARA GWAGGAHLIN AFILLTCVSA
INSSIYIGSR TIVNLANEGA APKFFRRVNK TGVPYAAVIL MNLFGFLSLM NISTGAAKAY
GYIVNLSGVA VFIVWGNVCF YHIRFRQAWK LQGRSVSELP YKGLWYPILP IFGIVLNVFL
ALVQGWSYFK PFDAGNFVDA YVLLPFFGLL YVFFKLVNRT KWVNLLEVDL DEGRRKDVRD
HVTSGEE
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