| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_52351 |
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| Symbol | DUR3.1 |
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| ID | 4851229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 1257430 |
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| End bp | 1259604 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640392937 |
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| Product | urea active transport protein |
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| Protein accession | XP_001387472 |
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| Protein GI | 126274215 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0516586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.828998 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTTC TTGCTGTTAC TTTGGACCAA GGTGCCGGAT ATGGTGTCGT GGTTGGCATT
GGTGCCCTTT TTGCTTTTGG TATGATTTTC ACCACTTATG TATTAAGAAG ATACAATAAA
GAAATCATTA CTGCTGAAGA ATTCGCAACT GCAGGTAGAT CGATCAAAAC TGGGTTGATT
GCTGCTGCCG TTGTTTCTTC ATGGACTTGG GCTGCTACCT TGTTGACTTC CACAACTATG
GTCTACAACA ATGGTATTTC TGGAGGATTT TTCTATGCTG CTGGTGCTAC TTGTCAAATT
ACTCTTTTCG CCTGTTTGGC CATTAAGGGT AAGGAAAGAG CCCCTGGTGC GCATACTTAC
TTGGAAATCG TTAAAGCTAG ATACGGCACC ACCTGTCACT TGGTCTATGT TTTCTGGGGT
CTTGCTACCA ACATCTTGGT CACGGCCATG TTGTTGACTG GTGGTTCTGC CGTGGTCAAT
GACTTGACTG GAATGCACGT TGTTGCAGCT ATTTTATTGT TACCACTTGG TGTTGTCGCT
TATACACTTT TCGGTGGTCT TAAGGCTACC TTCTTGACAG ATTACGCCCA CACCGTCATT
ATGGTTGTAA TTATTTTGAT CTTTGCCTTC ACCACCTGGG CTACTTCTGA TGTTTTGGGT
TCTCCAGGTG CTGTCTGGGA AGCTGTTACT GCATTGGCTG AAACCCAACC AAGAGATGGT
AATGCTGGAG GTTCTTACTT GACCTTGCAC TCCAGATCTG GTGGTATTTT TTTCGTCATC
AATATCGTTG GTAATTTTGG TACCGTGTTC TTGGATAACG GTTACTTCAA CAAGGCTTTC
GCTGCCAACC CTGGAGCTGC CTTACCTGGA TATGTTCTTG GTTCTCTTGC CTGGTTCGCT
ATTCCATGTT TCACTTCTTT GACCATGGGA TTGGCTGCTT TGGCTTTGGA AGGTACAGAT
GCTTGGCCAA CAGACCACAA GATGACTCCC CAAGAAGTCT CTGCTGGTCT CGTTCTTCCA
AATGCCGCCG TTGCCTTGTT GGGTAAGGGT GGTGCTGCCT GCTCGTTACT TATGGTTTTC
ATGGCTTGTA CATCTGCTAT GTCTGCTGAA TTAATTGCTA CTTCATCTAT CTTCACTTAT
GATATTTACA GAACTTACAT CAACCCTGAA GCTACCGGTA AGAAATTGAT CTGGGTTTCT
CACATTTCCG TCATTGGGTA CGCTTACGTC ATGGCTGGTT TTGCTATTGG CTTATACTAC
GCTGGTGTAT CTATGGGTTA CTTGTACGAG TTAATGGGTA TCATTATTGG TGGTGCTGTA
TTGTCATCTG CCTTGTGCTT GCTTTCAAAG AGACAGAATG TTCAAGCTGC TATTTTCACT
CCTCCTATCG CCACAGCTCT TGCTATTATG TCTTGGTTGG TTTGCACCAA GAAGATGTAC
GGTTCCATTA ACCTTACAAC CACCTTCATG GACGATCCTA TGTTGACTGG TAACGTTGTT
GCCTTGTGCT CTCCATTGAT CTTTGTTCCT TTACTCACCA TCATCTTCAA GCCACAAAAC
TTCGACTGGC AAATCTTGAA ATCCATTCGT AGAGTTGATG AAGAGGAAGA AATCTTGGAA
GCTGAACATG TAGCAGTTGA TCACGAAAAG GTTCATCCAG TTAAGTCCCA AGTGTCAGTT
ATTGCTAGCG AATTGGTGGA TCTCGAAAAG GACAAATACG CTGAAGAAGA ATTGATGTTG
CATAACTCTT TCAAGAAGGC TGTCATTATT TGTGTTGGTT TGACTCTTTG TCTTTTGATT
CTTTGGCCAA TGCCAATGTA CGGTACTTCC TACATTTTTT CCAAGCGTTT CTTCACCGGT
TGGGTGGTAG TTATGTTCAT TTGGATTTTC TTTACTGTGG GTATGGTTAT CATTTATCCT
ATCTACGAAG GTAGATTCGC TCTCTACAAT ACTTTCAGAG GTATGTACTG GGATTTGACT
GGTCAAACTT GGAAGTTGAG AGCATGGCAA CAAGAACATC CCGAGAAGAT GCATGCTGTT
GTTTCGCAAG TGAGTAACCA AATATTAGCT GCTACTCAAT CTCAAATCTA CGAAGGTAAG
ACAGTGTTCA ATGGAGCCAT TACTCCTCGT AACATAGACG ACGAAATTAG TGATCTCAAG
AAGGACTCCA ATTAG
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| Protein sequence | MSLLAVTLDQ GAGYGVVVGI GALFAFGMIF TTYVLRRYNK EIITAEEFAT AGRSIKTGLI
AAAVVSSWTW AATLLTSTTM VYNNGISGGF FYAAGATCQI TLFACLAIKG KERAPGAHTY
LEIVKARYGT TCHLVYVFWG LATNILVTAM LLTGGSAVVN DLTGMHVVAA ILLLPLGVVA
YTLFGGLKAT FLTDYAHTVI MVVIILIFAF TTWATSDVLG SPGAVWEAVT ALAETQPRDG
NAGGSYLTLH SRSGGIFFVI NIVGNFGTVF LDNGYFNKAF AANPGAALPG YVLGSLAWFA
IPCFTSLTMG LAALALEGTD AWPTDHKMTP QEVSAGLVLP NAAVALLGKG GAACSLLMVF
MACTSAMSAE LIATSSIFTY DIYRTYINPE ATGKKLIWVS HISVIGYAYV MAGFAIGLYY
AGVSMGYLYE LMGIIIGGAV LSSALCLLSK RQNVQAAIFT PPIATALAIM SWLVCTKKMY
GSINLTTTFM DDPMLTGNVV ALCSPLIFVP LLTIIFKPQN FDWQILKSIR RVDEEEEILE
AEHVAVDHEK VHPVKSQVSV IASELVDLEK DKYAEEELML HNSFKKAVII CVGLTLCLLI
LWPMPMYGTS YIFSKRFFTG WVVVMFIWIF FTVGMVIIYP IYEGRFALYN TFRGMYWDLT
GQTWKLRAWQ QEHPEKMHAV VSQVSNQILA ATQSQIYEGK TVFNGAITPR NIDDEISDLK
KDSN
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