| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_52208 |
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| Symbol | HDQ2 |
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| ID | 4851380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 1651077 |
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| End bp | 1652012 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | |
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| GC content | 44% |
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| IMG OID | 640393088 |
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| Product | hydroxyquinol 1,2- dioxygenase |
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| Protein accession | XP_001387959 |
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| Protein GI | 126274432 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.833687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAAG AATTCACAGA ATATGTAAAG ACTGCTTTTG GTCCAAAGTC TACCCCAAAG
ACCCGTCGTG TTCTTGGATC CTTGATCCAA CACATTCACG ACTTCACCAG AGAAAACCAC
ATCACTGTGG ATGAATGGAT GTGGGGTGTT AACTTCATCA ATAGAATTGG ACAAATGTCT
GATGAGAAGA GAAACGAAGG TATTTTGGTT TCTGACGTAA TTGGATTGGA AGCTTTGGTC
GATACCATCA CCCACGCTTC CGATGCTAAG GGACACACTT CTTCTGCTAT TATTGGTCCA
TTCTACCGTG ACAACTCCCC TGTGTATCCC AATGGCGCCT CCATTATTCA GAAGGAAGTT
GGTGGTGAGA AGACCTTAGT ATCGGGAAAG GTCACTGACA CCAAGGGCCA ACCATTAAAG
GGTGCCAAGA TCGAGGTCTG GCACTGTGCA CCAAATGGTT TATATGAGCA GCAAGATCCT
GAGCAACCGG AATACAACTT GAGAGGTACT TTCTATGCTG ATGACGAGGG AAACTACTCC
TTTGTCGGTT TAAGGCCAAC TGCCTATCCA ATCCCATACG ATGGTCCAGC TGGCGATTTG
TTGCAGCTTA TGGACAGACA TCCTATGAGA CCTGGCCACA TTCACTGGAG AGTGAGCCAT
CCAGAATTCC ACACATTGAT TACTCAAATT TATGACAGTG AATGTAAGTA CGCCAAGGAT
GATTCGGTTT TCGCTGTTAA GGAGGACATT ATCGTTAATT TCAACCCTGT TGAGGACAAT
TCCCCATTGA AGGCCAAGGG TATTCAAAAC ACCTTAGACT ATGATATTAT TTTGGTCTTG
GAAGAAGAAA TTAGAAAGAC ACGTCAAAAG GTTGAAGACC AGCATGCGGC TGTGGAAAAG
ACTTTGACGG CCAGATTAGA TTCTGTTAAC GTTTAA
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| Protein sequence | MSQEFTEYVK TAFGPKSTPK TRRVLGSLIQ HIHDFTRENH ITVDEWMWGV NFINRIGQMS
DEKRNEGILV SDVIGLEALV DTITHASDAK GHTSSAIIGP FYRDNSPVYP NGASIIQKEV
GGEKTLVSGK VTDTKGQPLK GAKIEVWHCA PNGLYEQQDP EQPEYNLRGT FYADDEGNYS
FVGLRPTAYP IPYDGPAGDL LQLMDRHPMR PGHIHWRVSH PEFHTLITQI YDSECKYAKD
DSVFAVKEDI IVNFNPVEDN SPLKAKGIQN TLDYDIILVL EEEIRKTRQK VEDQHAAVEK
TLTARLDSVN V
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