Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_52198 |
Symbol | |
ID | 4851205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | + |
Start bp | 1191379 |
End bp | 1192617 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | |
GC content | 42% |
IMG OID | 640392913 |
Product | zinc finger protein with unknown function |
Protein accession | XP_001387457 |
Protein GI | 126274191 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.038348 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTACGT GTAATACCTG TAGTTTGCAG TTTCCCACCG CTGAAGACCA GCGGGTTCAC ATGAAGTCAG AATGGCACCG TTACAATCTC AAAAGAAGAG TAGCCCAGTT ACCTTCGATA GATGAAGATA CTTTTAACTC CAAAGTAGCC TCATTAACTT TGACAGAAGA GGAAGAGCCC AAAAAGAAAG AAAAGCAAGT GACTAAGAAG GAGCAAAGAA GAAGAGATAA GGAAGCTATA CAAGCTAAAA AGAGAGAGAT CTTAGAAACA GCCAAGAGAG CTATGTTAGC TAAGATGAAA GAGAATGGAG AAATGCCTTC TGAACAAACC GAGAATGTCG AACAAGCTGA AGACAGCAAA CAAGTTGAAG AAGTTTCTCC AGAAAATGTT GAAGATAAAG ATGAAATAGT TGAAAAGACA GAGCATGAAA ATGAAACTCC TCTCACTATC GAAGAAGAAG AAAAGAAGTT GTATGAAGAA AAGATGGCCA ATAAGATTGA GATCACACCC ACAACGTGTT TGTTCTCACA TCCCAAGTAT AATAAGGTAT TTGACACTGT AGATGAGAAT ATTGAACACA TGTGGAAGAA CTTTGGTCTC TACATACCTG AACAGAACTA CTTGGTAGAC AAGGAAGGTT TGATAGGGTA CTTGGGAGAA AAGATCAGTT TCGGTTTCTG CATAGCCTGT AGCTACCAGG GCCGTAATGC CGAAGCTGCA AGAGAGCACA TGAAGCAAAA GAGACACATG AGAATACCAT ACGAGACTGA GGATGAAAAA TTGGAGATTT CACAGTTTTA CGATTTCTCT TCCACCTATG ACGATGTAGT TCCTGTTACA AATGGAGATG ACGAAGGAGA ATGGGAAGAT GTTTCTGAAG AAGAAGGCGA AGGAAGTGAA GATGACGATG AGGATGGAGA CGATTTACCT CTTCCAGAAC ACGATGCCCT CTACCAGCAT GGTCATGAGC TTGTCTTGCC TTCTGGTGCA GTTATTGGCC ATCGTTCCAT GGCCAGATAC TACAGACAGA ACTTGGCTCC GGAAAGAGTA TTATCTGAAG GCCAGGGTAC AGTTATTGCT GCTGAGACTA GACACATGAT GACTGTGAGA GACAGACAGG TATTGGCTAC CCAGAAGAGA GCATGGGGCA GACAGAAGAA GAGAGAAGAT ATTAACGACA GAAGGGCTGC TAAGTTTGTT AACAACCAAC CTTACTACAG AGACCAGTTA TTGCAATAG
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Protein sequence | MFTCNTCSLQ FPTAEDQRVH MKSEWHRYNL KRRVAQLPSI DEDTFNSKVA SLTLTEEEEP KKKEKQVTKK EQRRRDKEAI QAKKREILET AKRAMLAKMK ENGEMPSEQT ENVEQAEDSK QVEEVSPENV EDKDEIVEKT EHENETPLTI EEEEKKLYEE KMANKIEITP TTCLFSHPKY NKVFDTVDEN IEHMWKNFGL YIPEQNYLVD KEGLIGYLGE KISFGFCIAC SYQGRNAEAA REHMKQKRHM RIPYETEDEK LEISQFYDFS STYDDVVPVT NGDDEGEWED VSEEEGEGSE DDDEDGDDLP LPEHDALYQH GHELVLPSGA VIGHRSMARY YRQNLAPERV LSEGQGTVIA AETRHMMTVR DRQVLATQKR AWGRQKKRED INDRRAAKFV NNQPYYRDQL LQ
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