Gene PICST_52184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_52184 
Symbol 
ID4851520 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp2047050 
End bp2047546 
Gene Length497 bp 
Protein Length132 aa 
Translation table 
GC content45% 
IMG OID640393228 
Productpredicted protein 
Protein accessionXP_001387630 
Protein GI126274736 
COG category[L] Replication, recombination and repair 
COG ID[COG3695] Predicted methylated DNA-protein cysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.267947 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCA CCGATGAGAG CAAGAACTTC CACCACGGAG TGTACACCGT AGTGCTGCTT 
ATACCCTACG GACATGTAAC CAGCTACGGT AAGTTTAGTT TTGTAGATCA AACAGCTACC
TTGCGGAGAT GTGATCTCAT ACAAGTTAAG AATTGGCAAA CAGTAGAACA GTACTAACTT
CTACAGGACA TATAGCTTAT TTGCTCAACA AGCCACAGAA TTCACGACAG GTCGGCTCTG
CGCTTAAACA CTTGAGCATT GTCTTGCAAT CACTCAGACA AGACCTTCCT GAAGAGGAAA
GGCAAGACTA CTTCACCGTA GACACTTTGC CGTGGTGGAG AGTACTTCTG AGCGCAGGTA
AGATCTCTCC TCGTGGCAAT TCAAATGCCG AGTACATCCA GGCAATCAGG TTGCAAGAAG
AAGGTGTAGC AGTTCTGTCA GGGCATAAAG TAGATCTTGA CGAATATGGC TGGTTTCCGG
ATGAAGTTGA CTTCTAA
 
Protein sequence
MNLTDESKNF HHGVYTVVLL IPYGHVTSYG HIAYLLNKPQ NSRQVGSALK HLSIVLQSLR 
QDLPEEERQD YFTVDTLPWW RVLLSAGKIS PRGNSNAEYI QAIRLQEEGV AVLSGHKVDL
DEYGWFPDEV DF