| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_52120 |
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| Symbol | TMT1 |
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| ID | 4851136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 1023475 |
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| End bp | 1024407 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 640392844 |
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| Product | trans-aconitate methyltransferase 1 |
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| Protein accession | XP_001387839 |
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| Protein GI | 126274122 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.561665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.159026 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGCCT ATTCTGAAAC TACCTTTGAT AGCAAGCACT ATGACGACAC TAGGCCCAAC
TACCCTGAAG CCTTTTATAA GGAATTGCTC CTGTACCATT CTGCAGTTCT GAAAGGGGAC
GACTCTAGGT TGACCACAGC TGTTGACTTG GGTTCTGGTT CAGGATTTGT TACTTTCAAG
CTCTTGGACT ACTTCAAGAA GGTCTATGGT GTAGATCCAT CCTGTAAGAT GATTATGCAA
TGCAAGGAGA GCGAGCAATT TGAGGAAGCC AATGCTGAAG AAGATCGTAT TGACTTCCAT
CCTGGAACAG GAGAATTCTT TACGGTTGCT ATCAACAACC ATTCGGTTGA TTTAATTACC
GCTGGTGAAT CTTCGCATTG GTTTGACCAT CCTCTATTCT TTAAGGAGGC GAACCGTGCC
CTTAAGCCTA ATGGCACGTT GGCATTCTGG CTTTACAAGG ACCCGGTGTT TATTGGCCAT
CCCAAGGCCA ACGAGATTTA CACGAATTAC ACCTATAATT CGTCGATTGA GAAAAACCCG
GACGATGGTT TCGAAAAATG GATGGGGCCC TACTACCAGC AACCAGGTCA CGACTATTTG
AGAACCTTGA TGAAGGAAAT CGAAGTGCCT GAAGACTTGT ACTACGACAT CCAGAGAGTT
GAGTACATCT CAGAACGAGA TGGAGTTCCA GACAACTTTG ACCCAAAGGC TGCGAAAACC
AAGCTTTTCA TCCACAAGAA AATCACAGTT AAGTGGTTCC ATGACTACGT CAAGAGCTGG
AGTGCTTACC ATTCTTGGAT GAAAGAGCAT GGGGAAAAGT ACGATATTGC CGATAAGTTT
GTCGACGAAT TGAAAGAGGC ACTGGGCTGG CAGGATGACA CTGAGTTGGA TGTTGTCTGG
GACACAGTCT ATACGTTTGC CAGAAGAAAG TAG
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| Protein sequence | MSAYSETTFD SKHYDDTRPN YPEAFYKELL LYHSAVLKGD DSRLTTAVDL GSGSGFVTFK
LLDYFKKVYG VDPSCKMIMQ CKESEQFEEA NAEEDRIDFH PGTGEFFTVA INNHSVDLIT
AGESSHWFDH PLFFKEANRA LKPNGTLAFW LYKDPVFIGH PKANEIYTNY TYNSSIEKNP
DDGFEKWMGP YYQQPGHDYL RTLMKEIEVP EDLYYDIQRV EYISERDGVP DNFDPKAAKT
KLFIHKKITV KWFHDYVKSW SAYHSWMKEH GEKYDIADKF VDELKEALGW QDDTELDVVW
DTVYTFARRK
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