| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_52102 |
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| Symbol | YDF1 |
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| ID | 4851310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 1469192 |
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| End bp | 1470007 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | 640393018 |
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| Product | serine dehydrogenase |
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| Protein accession | XP_001387515 |
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| Protein GI | 126274325 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTACG GAAGCAAGGC TGCTGAGAGA CTTGCCAACA AAGTCATTCT CATCACAGGA
GCCTCTGCCG CGGCAGGAAT TGGCGCTGCC ACAGCTAGAG AATTCGCCGA AGCTGCTCAT
GGAAATATCA AATTGATCTT GACTGCGAGA AGAAAGGACA AATTGGACGC CTTGGCAAAA
GAATTGACCG ACAAGTACGA CAACATCAAG GTCCACACTG TTGCACTCGA TGTGACGAAG
TTGGAATCAA TTGGTCAGTT CGTCAAGGAT CTTCCTCAGG AATTTGCTGA CATCGATGTC
TTGGTCAATA ACGCTGGTTT GGCCTTGGGA AGAGACCCAA TCGGTGAAAT TTTGCCCGAA
GATATCCAGG GCATGTTCCA GACCAATGTT CTCGGTTTAA TCACCTTGAC CCAAGCAGTC
TTGCCCATCT TCAAGGCTAA GAACTCAGGA GATATCGTCA ACTTGGGCTC AATCGCTGGT
AGAGATCCTT ACCCTGGTGG AGGAATCTAC TGTCCAACTA AGGCTGCAGT CAAGTCATTT
TCTCATGTGT TGAGAAAAGA ACTCATCAAC ACCAGAATCA GAGTTTTGGA AGTGGACCCC
GGTAATGTCG AAACCGAGTT CAGTATCACT AGATTCAAAA ATGACGTCGA TAAGGCGAAA
GCTGTGTATG CTAACACCGA ACCTTTAGTG GCTGAGGACA TCGCCGAAGT CATTGTATTC
GGTATCACCA GAAAGCAAAA CACCGTTATA GCCGAAACTT TGATCTTCTC GACCAACCAG
GCCTCCGCTT CCCATTTGTA CAAGGGTCAG GTCTGA
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| Protein sequence | MSYGSKAAER LANKVILITG ASAAAGIGAA TAREFAEAAH GNIKLILTAR RKDKLDALAK
ELTDKYDNIK VHTVALDVTK LESIGQFVKD LPQEFADIDV LVNNAGLALG RDPIGEILPE
DIQGMFQTNV LGLITLTQAV LPIFKAKNSG DIVNLGSIAG RDPYPGGGIY CPTKAAVKSF
SHVLRKELIN TRIRVLEVDP GNVETEFSIT RFKNDVDKAK AVYANTEPLV AEDIAEVIVF
GITRKQNTVI AETLIFSTNQ ASASHLYKGQ V
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