Gene PICST_52100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_52100 
SymbolCIA30 
ID4851010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp705960 
End bp706748 
Gene Length789 bp 
Protein Length262 aa 
Translation table 
GC content49% 
IMG OID640392718 
Productpossible complex I intermediate associated protein 
Protein accessionXP_001387774 
Protein GI126273971 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTGA GAACACTCGG CTTGAACTCG TCGCTCAAGG GGCTTTTTGC CACCAAGCCA 
GCAGAGGTTG TCAAGGCTAT GCACACCGTG CTTGACTTCA AGCAGCACGG CGACGAATCG
CTCAACAACG TCATGACCAG ATCCGACAAG GAGATGGGAG GCTACTCTAC GGTACACTTC
GAGCTCGATG ACAAGGAACA CGTCGGCCAC TTCCACGGCT ACTTGTCGTT GGACTTGCCC
AAGGACAACC CCGAAGTCAC GAGATCTGGC TATGCCATGT TTAGAACAAA GGACCAGAAG
GAGTCGTGGT TGTCTGGAAA CAGCTACTGG GACTGGTCCA ACTACTCTTC GTTGGTCTTG
AGAGTCAAGG GCGACAGAAG AAAGTACTTG GTCAACATTC AGACCAACAC ACCTTTGGTG
ACTGACTTGT TCCAGCACCG TTTGTTCCTC AACCATCCTG GTGAATGGGA AACCGTGGTG
ATTCCACTCA ACGACTTTGT CATGACTAAT TGGGGTGTGA TTCAGGATGG AAGTGAGATC
AACAAGTCGG AAGTCAAGAC AGTTGGCATT GGTTTATTGG ACAAACAATA TGGTCCATAC
TCCTTGAAGG TCGACTGGAT TAAAGTAATG GCCGGAACAG AAGTAGCCAA GGAAACCAAG
AAGTCGAGAT CGGAAAAGAC TCAATCGTTC GAAAACGGCG GAATCGATGT TGATGGCCAG
GAAATCCCAA TCCACGGTGC TGCCATTAAC TCTGGTAAAT TTGAAGACCC AAAGAACACC
GTTTTCTAA
 
Protein sequence
MSLRTLGLNS SLKGLFATKP AEVVKAMHTV LDFKQHGDES LNNVMTRSDK EMGGYSTVHF 
ELDDKEHVGH FHGYLSLDLP KDNPEVTRSG YAMFRTKDQK ESWLSGNSYW DWSNYSSLVL
RVKGDRRKYL VNIQTNTPLV TDLFQHRLFL NHPGEWETVV IPLNDFVMTN WGVIQDGSEI
NKSEVKTVGI GLLDKQYGPY SLKVDWIKVM AGTEVAKETK KSRSEKTQSF ENGGIDVDGQ
EIPIHGAAIN SGKFEDPKNT VF