| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_52035 |
|---|
| Symbol | ARH1 |
|---|
| ID | 4851278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | + |
|---|
| Start bp | 1393749 |
|---|
| End bp | 1395194 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | |
|---|
| GC content | 41% |
|---|
| IMG OID | 640392986 |
|---|
| Product | mitochondrial protein |
|---|
| Protein accession | XP_001387494 |
|---|
| Protein GI | 126274264 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.176886 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATAGCTGTAG TAGGAACTGG TCCAGCAGGT TTCTATACTG CTCATCATAT TCTCCTGAAA
TGTTCTGATA ACATGAGGAT CAACTTGGAT TTCTTTGAGA GGTTGCCGGC TCCATTCGGT
TTGAGCCGTT ATGGTGTTGC CCCCGACCAT CCCGAAGTCA AGAACTGCGA AGAGTACTTG
GAGAATATAA TGGACAAGTA CTCAGATACA AAAGATAACA ATAGCCATAA GGTTCGATTT
TTAGGGAACG TCAATATCGG AAAGGATATC TCGTTAAAGC AATTAGAGTC GTATTACCAC
TCCATCGTTC TTTCATATGG TAGCACTTCG GCTGACAACA AGCTTCAAGT AGCTGGTTCA
GATTTGCCAG GAGTTATTTC AGCAAGACAG TTTGTTAATT GGTACAATGG GCATCCTGAC
TTCTATGCCA CTGGAAAAAA GTTTGTTCCT CCTCCTCTTG ACCAGATTGA GGATGTGACG
ATAATTGGAA ATGGTAATGT TGCCTTAGAT GTAGCACGTA TCTTGTTGGC CGACCCAGCA
ACCCATTGGT CTAAGACGGA TATATCTGTA GATGCGTTAC AGGTGTTACA AAACAGCACA
GTCAAGAATG TCAACATCGT AGCCAGACGT GGGTTATTGG AGTCGGCTTT TTCAAATAAA
GAGATCAGAG AATTGTTTGA ACTCTCGAAC GAGAATAGCA TCAAGTTCAT TCCTCTAGAC
GACAAGGAAT TCGAAAACAT AGACATAAAG AGTTTAGGAA GAGTTGATAA GAGAAAAGTC
TCTATAATAG AAAAGTATAC AAAGGCTTCG CATACAGCTC CGGCAGCCGA CAGGACCTGG
TCTCTCCAAT ATTTAAAAAG TCCCAAGGCA TTCCTCCCTC ATGCGTCAAA TGCCAAGTTG
TTGTCTGCAA CTGAGGTTGT CAAGAACGAA TTGATACATG ATCCACTTAC AAATACCGCT
AAAGTACGCC CTACCTCTGA AAGTGAAACC ATCAAAAACG AGTTAGTTAT TTTGTCTATA
GGGTATCAAG GATCACCGTT ACTTGGATTT GAAGAAAATG GGATCCTTTT TGAAAAGAAC
CGCTTGTTCA ACAAACATGG TCGTATCTTG TCTATAGAAT CGAAAGAAGA GGAGGAACAT
AATTCAGTTT ACAAGAAGGG TTGGTATACT TCTGGATGGA TTAAGAATGG TCCAAAGGGC
GTTATTGCAA CAACCATGAT GGATTCGTTT GATACGGCTG ACAAAGTTCT TGAGGACCTT
TCCAATGGGA TTCACCTAGA AACATCCGGT GGTGATATTC ACGATTTGTT GAAGGATAAG
ACAGTAGTGG GCTGGGATAA TTGGAAAGTT CTTGATGCCT ACGAGAAAAG CAAGGGTGAG
AAAGAGGGTA AGTCGAGATA CAAGATCTGT AATTCGGAAG ACATGATCAA AATTGCATGT
AATTAG
|
|---|
| Protein sequence | IAVVGTGPAG FYTAHHILLK CSDNMRINLD FFERLPAPFG LSRYGVAPDH PEVKNCEEYL
ENIMDNHKVR FLGNVNIGKD ISLKQLESYY HSIVLSYGST SADNKLQVAG SDLPGVISAR
QFVNWYNGHP DFYATGKKFV PPPLDQIEDV TIIGNGNVAL DVARILLADP ATHWSKTDIS
VDALQVLQNS TVKNVNIVAR RGLLESAFSN KEIRELFELS NENSIKFIPL DDKEFENIDI
KSLGRVDKRK VSIIEKYTKA SHTAPAADRT WSLQYLKSPK AFLPHASNAK LLSATEVVKN
ELIHDPLTNT AKVRPTSESE TIKNELVILS IGYQGSPLLG FEENGILFEK NRLFNKHEEE
HNSVYKKGWY TSGWIKNGPK GVIATTMMDS FDTADKVLED LSNGIHLETS GGDIHDLLKD
KTVVGWDNWK VLDAYEKSKG EKEGKSRYKI CNSEDMIKIA CN
|
|---|
| |