| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_52015 |
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| Symbol | PET112 |
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| ID | 4851155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 1066287 |
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| End bp | 1067813 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | |
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| GC content | 39% |
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| IMG OID | 640392863 |
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| Product | glutamyl-tRNA (Gln) amidotransferase subunit B (PET112) |
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| Protein accession | XP_001387849 |
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| Protein GI | 126274141 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.713486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.82295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGGTCTA TACGACTATT CCATACTTCA TCCACATGGT TGAGTAAGTT TAAACTTGAC
CCCAACTACA AGTTCAAATG TGGGATCGAA ATACATACAC AGTTGAAGAC CAAGTACAAA
CTCTTTTCTT TGTCTCCTAC CAGTTTCTAC TCTACACCCA ATTCTAAGGT CAGTTACTTT
GACTGCGGGT TGCCTGGAAC GCAGCCAAAG TTGAATCCAG AAGCATTGTA TTTGGCTTTG
AAGCTTGCAG TTGCATTGGA TTGCGAAATT CAGCAGAACT CATCCTTTGA TCGTAAGCAT
TATTTCTATC CAGATCAGCC CTTAGGTTAC CAGATCACCC AGCACTATCA TCCGATAGCC
AAAAACGGGT TCCTAGAATT GAATTCCAAG TTTGACGAGA TAAAGAATTC TTCAAAAAAA
ATCAATATAG AGCAGATTCA AATAGAACAA GATACGGGCA AAACGACATA CGACAAGTTT
GATAAGTCGG TGAAAGTAGA CTACAACAGA AGCAATATGC CATTAATTGA GTTGGTCACC
AAACCAGATT TCGAAGATTT ACAACAGGTA AGAGCATTTG TAAAGAAATA CCAGACTATG
GTAAGACACC TTGACATTTG CACGGGGGAT TTAGAGACTG GTGCCATTAG AATCGACGTC
AATGTCAGCG TCAATGGAAA TCCTAGAGTG GAGATCAAGA ATTTGGGTAG CAATAGTGAC
ATTCAAGATG CATTGAAATA CGAATATACC AGACAAGTTG ACTCAATCAA GAATAACGAA
AAAATTATTC AGGAGACAAG AGGCTGGACT GGAACTAAAA CTGTGAGTTT GAGATTAAAA
GAAGATGCTG TAGATTATAG GTACGTTCCA GACTCCGAAT TACCCTTTAT CAACCTTAGT
CCAACAATTG CGTCTGATAT CAAAGAAAGC TTGCCAGAAT TGCCCGAGCA GATATTGCAA
AAGTTGACCT CGAAACCATA CGACTTGGAA TTAAAATATG CAAGATTCCT TACCGAGAAT
AGAGATACTC TTAACTACTA CTTCCAATTG TTCAAAAGTG TTGCTGACAG ACACCATTCA
GGAAAGCTAG CAAACAATTG GTTCATCCAC GAGTTCTTGG GAGCCTTTAC GAAGATTAAT
GTGAAAGTCG ATCTAGATAT TCTTCCAGCC AACTTCCTTG CAGATTTAGT TTTGCAAGTT
GCAGAAAAAA ACATTTCTAC AACATCTGCA AGACTTTTGC TATTGCAAAT TATTCAAACT
CCAGAAGATA AAGGAAAACC AATTCAGGAC CTAATTGTAC AATACGATCT AGGGTCCCCA
GTAGATATGT CAACCGAAGA CTTGAATGAT GCAGTTAGCG ATATTTGCTC GGAAATCATT
TCCAACAACG CTGACGTAGT TGAGAGAATA AAGAAAGGAC AGAAGAATAG CATCAAATTC
TTAATTGGAC TTGCAATGAA AGAAACACAA GGGAAGGTCA ATGCCAAAAC CTTCTCAGAA
AAATTTAACG AACTACTTGA CTTGTAA
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| Protein sequence | MRSIRLFHTS STWLSKFKLD PNYKFKCGIE IHTQLKTKYK LFSLSPTSFY STPNSKVSYF
DCGLPGTQPK LNPEALYLAL KLAVALDCEI QQNSSFDRKH YFYPDQPLGY QITQHYHPIA
KNGFLELNSK FDEIKNSSKK INIEQIQIEQ DTGKTTYDKF DKSVKVDYNR SNMPLIELVT
KPDFEDLQQV RAFVKKYQTM VRHLDICTGD LETGAIRIDV NVSVNGNPRV EIKNLGSNSD
IQDALKYEYT RQVDSIKNNE KIIQETRGWT GTKTVSLRLK EDAVDYRYVP DSELPFINLS
PTIASDIKES LPELPEQILQ KLTSKPYDLE LKYARFLTEN RDTLNYYFQL FKSVADRHHS
GKLANNWFIH EFLGAFTKIN VKVDLDILPA NFLADLVLQV AEKNISTTSA RLLLLQIIQT
PEDKGKPIQD LIVQYDLGSP VDMSTEDLND AVSDICSEII SNNADVVERI KKGQKNSIKF
LIGLAMKETQ GKVNAKTFSE KFNELLDL
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