| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_51972 |
|---|
| Symbol | GBD1 |
|---|
| ID | 4851102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | + |
|---|
| Start bp | 939116 |
|---|
| End bp | 940201 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | |
|---|
| GC content | 43% |
|---|
| IMG OID | 640392810 |
|---|
| Product | flavonol synthase |
|---|
| Protein accession | XP_001387413 |
|---|
| Protein GI | 126274088 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3491] Isopenicillin N synthase and related dioxygenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.842126 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCC TGTCCAACAT AAGACCTTGG CAATCGCCAG AAGAAACTCA GGAAGATCTA
GACTGGGCAA ATCTTACCAT TATTGACTTG GCCCACTTTG ATGAACCTGG CCAGAAGCAA
ATTCTTGCCA ATCAGCTAAA GGAGGCTCTG AACTCAGATG GTTTCTGGGC TGTGATTAAC
GGAGGATTTG ACCAAAATGA TATCAATGAA GCATTTGCCT ATGGAAGAAG TTTCTTCGAA
GATTACACTG AAGAAGAGAA GAAAGCGTTG GAAGTAGATT TCACCACTGG AAACTATTTT
GGCTACAAAG TCCGTGGAAA CAAGCCTGTT TTTGGCACCC AAGTCAGAGA CAACACCGAA
ACCCTCAACA TTGCCAAATT CACCAAAGAT GACACATTTG CCGAATACCA CAAGAACAAC
TTCATCCAAA ATAACCATGA TAAGTTAGCC CAACTCTCTC GGAAGGTGTT TGAAGTTGCC
CGTAAGTTAT TTATATTGTT TGCCATTATT CTCGAACTAG ATGAGAATTA TTTTGTTGAT
CGTCATCTTT ATGACGATCC CAGTGACGAT CTGCTTCGGT TCATGAAATA TCACCCAAGA
ACAAAAGAAG AAGACGCTCA GGTAGAGAAC ATATGGGCAA GAGCACATAC TGACTTTGGG
AGTTTGACCC TATTGTTCAA CCAGGTGGTA GCTGGCCTAC AGATCAAGTT GGCTGACGGA
GAATGGAAGT ATGTCAAACC GGTCACTGGT GGACTTATCT GCAACATCGG AGATACTTTA
AATTTCTGGT CTGGAGGATA TTTCAAGACC ACTATTCACA GAGTAGTGAG ACCTCCTGAA
GATCAGGTTA ATGCACCTAG AATTGGAGCC TTCTATTTCG TTCGTCCAGG AGACAAAGCC
CAAATACAAA TTGCCCCATC TCCGTTATTG AAGCGTTTAG GGTTATACAG AGAAACCGAA
CCTATTGGTG GTACGGAATA CGTGAGAAAG AGAGTCAAGG ATTACCATGA CGTGAAAGGT
TATAATAAGC AGGCCGACAA GGTATTCAAG TTGGGAGAGT TTGAGGTTAT TGACGGTTTT
AATTAG
|
|---|
| Protein sequence | MTVLSNIRPW QSPEETQEDL DWANLTIIDL AHFDEPGQKQ ILANQLKEAL NSDGFWAVIN
GGFDQNDINE AFAYGRSFFE DYTEEEKKAL EVDFTTGNYF GYKVRGNKPV FGTQVRDNTE
TLNIAKFTKD DTFAEYHKNN FIQNNHDKLA QLSRKVFEVA RKLFILFAII LELDENYFVD
RHLYDDPSDD LLRFMKYHPR TKEEDAQVEN IWARAHTDFG SLTLLFNQVV AGLQIKLADG
EWKYVKPVTG GLICNIGDTL NFWSGGYFKT TIHRVVRPPE DQVNAPRIGA FYFVRPGDKA
QIQIAPSPLL KRLGLYRETE PIGGTEYVRK RVKDYHDVKG YNKQADKVFK LGEFEVIDGF
N
|
|---|
| |