Gene PICST_51834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_51834 
SymbolFRE1.5 
ID4851089 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp902176 
End bp904278 
Gene Length2103 bp 
Protein Length669 aa 
Translation table 
GC content40% 
IMG OID640392797 
Productferric reductase (FRE11) 
Protein accessionXP_001387813 
Protein GI126274075 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4097] Predicted ferric reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0465323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.992285 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TCCCTACATG TATCGCATCG GAGAGACTCA GGCTATCAAG CTTGTGCTCA AGTCTTACTT 
GAGCTGGTTA CTTTTCCTCC GGTCAATTCC AAAAGTAGAC ATGGAGAAGA AATAGACTAC
GCAAGTTTTT GCTCTACTGA AGAACAGCCT GCTCTAGGTT CCATGGCTCA TTGCTTGATT
GATAGTTTCA AGAATTCAAA CAAGTACGTG GAAGCGTTTG TCCACTCCTG TGGGGGATCT
TTGACGGTAG ATGATGTTCA TGAATCCTAC AATAATGCTA CTCAATTCTT GGTAAATTTG
ACTTCCATAA GTGACATTGG CGTCATGGTT TTTAAACCAG TTGCCGTGCC AGTAAAAAAG
GTTCAGGATT TGCTGACATT AATTTACAAC AGTGGATTGA ATGACAACTA CGACCTTTTC
TTCGGTATCA CGATGGTAAG TTACTGGTTC GTAATAATGC TAATTGCTGC TGTCAATCAC
TGGTTTTACT ATTTATTCCC TAACGTTGTC AAGTCTATGC ATGGTTCACT AATAAACGGC
ATCCGAAGGT CTTTCATACT TGCCCCATCC ATCTCCAAAC ATCATGCACA AGTAAGAAAG
TTCAAGTTCT TTCAATGGTT TGTACCATTG AGATTTGAGG CTTTGGTTAT CTTGGGATGG
CTTGTTCTTG CAATAGTCTT CTGCTCCGTT GGATACCAAA GACCAACGAT ATATTTTATG
GCTTTGCCCA TTGGAAGCAG ATCTGGTCTT TTGTTGGTGT ATTCGTTACC GGTTTTGGTT
TTGTTCCCTG GAAGGAATAA TTTTATGCAG TGGGTCACTG GCTGGTCTCA AGCTAGGTTT
CTTTTATTCC ATCGCTGGAT GGCAAGAATC ATGTTCTTGT TAACACTAGT GCATGTAACC
TCAAAGACAA TTGGACTCCA CCAACTCCAT GGTTATTCCT ACTACATGCA CCATTCATTT
ATTCGTTGGG GAGTCGTGGG TGCTGTTAGC ATTGGAGTTA TAGTCTTCCA ATCTATGAAT
ATTTTCAGAA GCATTAACTA CGAGTTTTTT GTTTTGACAC ACATTATACT TGCAATCATC
TTCATATTAT CTGGCTGGAA ACACGCTAGT GACGAAGAGA TTAATAGTCC TCAATCTTTC
TATGCTGCTG CTGCTGTTTG GGGTCTTGAT AGAGTGTTGA GAATAATAAG AATAATTTCC
TTTGGTGTCA AGAATGCTAC TGTCGAATTA CAGACAGATG AAATACTAAA GGTCACCGTT
AATCGTCCTA AACACTGGGT ACCCCACCCT GGTGCCCATG CCTTTATCCA TTTTCTCAGA
CCATCGTACT TCTGGCAATC ACACCCTTTC ACTATTGTCG ACTGCTCTAG CGAACAGAAT
ACTATTAGAT TCTATATAAA AGTCAAGGGT GGTGTAACAC ATGGACTCTA CAAACATTTG
CAATCTTCGC CTAATGGTAC AGATAATTTT AAGGTTCTAA TTGAAGGTCC TTACTCACAA
AGGTTACCAA TTCACAAGTT TGACAACTTG GTTTTTTTCT CAAGTCAAAC TGGTATTCCT
GGACTTTACA GTGAAGCTAT GTCTATGGCA CAAAACAAAG ACACCAGCAA CAAGAGAATT
AAATTTTACT GGGTGATTCG TGAATTAAAA TCTTTGGAAT GGTTCTACGA TGAACTTATG
AAGTTTAAAG GAACCAATGT TGAGCCAGTG ATTTACGTAT CCAAGCCAGA GTCTGATGTT
GAATATTTGA AGGACTCTGA GATGGGAAAA AAGAGGTCCG GCTCAAACCT GGATCAGTCT
GAAAAGCGGG AAACGTATCT TTCCGTTCAC GAAAAGAAAT ACTGGAACGA AAGAAGTAGC
AGTGTGAGCA GTTCAAGAAA CTCAATCTTA CAAAGAAGTC TCAGCTTTGT TGAATTCAGA
ACTGGAAGAC CAAACATTTC TGATATCGTC AAGAGTGAAA TCGAGTGCTC AGAAAAGTCT
GTTGCTCTTG TTGCCTGTGC TGCTCCATGC ATAGTGGATG ATATAAGAGA TGTAATAAGA
GAAGTGTTGG GTAAAGATAC TTCGAAGAGA ATTGAATTCT TTGACGAGAT GCAAGAATGG
TGA
 
Protein sequence
SLHVSHRRDS GYQACAQVLL ELVTFPPVNS KNYASFCSTE EQPALGSMAH CLIDSFKNSN 
KYVEAFVHSC GGSLTVDDVH ESYNNATQFL VNLTSISDIG VMVFKPVAVP VKKVQDLLTL
IYNSGLNDNY DLFFGITMVS YWFVIMLIAA VNHWFYYLFP NVVKSMHGSL INGIRRSFIL
APSISKHHAQ VRKFKFFQWF VPLRFEALVI LGWLVLAIVF CSVGYQRPTI YFMALPIGSR
SGLLLVYSLP VLVLFPGRNN FMQWVTGWSQ ARFLLFHRWM ARIMFLLTLV HVTSKTIGLH
QLHGYSYYMH HSFIRWGVVG AVSIGVIVFQ SMNIFRSINY EFFVLTHIIL AIIFILSGWK
HASDEEINSP QSFYAAAAVW GLDRVLRIIR IISFGVKNAT VELQTDEILK VTVNRPKHWV
PHPGAHAFIH FLRPSYFWQS HPFTIVDCSS EQNTIRFYIK VKGGVTHGLY KHLQSSPNGT
DNFKVLIEGP YSQRLPIHKF DNLVFFSSQT GIPGLYSEAM SMAQNKDTSN KRIKFYWVIR
ELKSLEWFYD ELMKFKGTNV EPVIYVSKPE SDVEYLKDSE MGKKRSGSNL DHSSRNSILQ
RSLSFVEFRT GRPNISDIVK SEIECSEKSV ALVACAAPCI VDDIRDVIRE VLGKDTSKRI
EFFDEMQEW