| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_51784 |
|---|
| Symbol | |
|---|
| ID | 4851046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | + |
|---|
| Start bp | 803824 |
|---|
| End bp | 805956 |
|---|
| Gene Length | 2133 bp |
|---|
| Protein Length | 710 aa |
|---|
| Translation table | |
|---|
| GC content | 39% |
|---|
| IMG OID | 640392754 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | XP_001387382 |
|---|
| Protein GI | 126274032 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.672165 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.613282 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAAG TCAAGAGCCA GGCTCCAAGG GCCTCTACCA GAAGAAGGCA CACAAACTCA
AAGCTTGGAT GTCTAAACTG TAAACGGAAG AAAATTAGAT GTAATGAAAG CTTGCCCATA
TGTGGAAACT GCGCTAAGGG TAAGAAGGAA ACATGCTCGT ATTTGAGCTT GGACCAGCAG
GAAATCGATC GAATTCGCTT AACCCATTCA CTCAGAGATA GTCAGAACAA GTTGCTTAAC
CTGAATTACA GATTGCCTAC CTCTTCCAAT AAAGACTCAC ACAAGTTCAA AAAAGTATCA
CCAGTTACTT CTGCCACAGC ATTGGAGTTC AAGTTTGAGC TTATGAAGTT GCCGTTGAGA
ATCCCTACCT TTGCATACCC TCCACTCCAG TTCAACAATC TATCGATGAA CAACTTTTCC
AACGAGTTCA GGGTCATCAA CGACTTCGAC ACCAGTGACG ATTCAGGTTC TTCTCCTCAA
AGTATCGTGG AGAACAGAAT GTTACTGGGA GGCTTTGTGC AGCCAACGTC TTTCACGAAG
TTGGACTTCA AAAGCAAAGT TGTTTGGGGT TCTAGTCCGT ATAAGAACAA ATTGAGAGCT
CCATTACAGT TAGATATAAA CATATTCACC GGGATGGAAA GCGTCGCCGA CCACCTCCGC
AGCTTCATAA TGTCCATAAA CAGCAATAGC CCTCATACTG ATGTGTTATT TAATACGTTT
GTGTGTTTAG GACGCACGAT TATTCTGACC TATTTCCAGC ACATTAAACA GTATGATTCT
CATTACCAGT GGTTGCAAAA CTATATTCCT TCATTTGAAT TACGTTGTCT TGAATCGCAC
GCATTGGCTC TTGCAAAGTT GAGAAGGGCC ATTAGCCATT TTCATTCCAT TGAGGCAACG
AAGGAAAATG CTGAAGAAAT AGAGTACTAC ACTACAATGC TCGGCTACTG TTACAGCTAC
TTGACAGCTG TTACTTTCAT GTTCAAATTT GAAAGCGATA GATACTTTAA TTCTTCAAGG
GGAGCGTTCA CAGTCTTTCA GATATATTTC AAATTTACAA ATGACCATAA CTTAGAACCC
AGTCCATTAT TCAAATTCCT TCTCAAAAAT ATCCGTATTA ACATATTGAG TGTGAACATC
CCGTCATACA ACCCGCATTT CTTTTACGAA CTTAACGACA ATTTCAAACT GTTGGGATTC
ATTTTCCAGA ATCAGAACAT TAAATTCGAG GATCCTGAAT TATCCAAATC TTATGATCGA
GTGTGTTATC GTTACAAGAC ACTCTTAACC TATTTGGAGG AGGAGATTTT GCCCCATATG
ATTCTGAAAA GAAACGAAAA GTTTGTCTCT ACTTATCCAC CGGAGGTAAT TTTTGGAGGG
TTAAAAAAAT GGCTCAGCAA TTTTCCTTCA GAAACTATAA CTTTCAGACC CATTTGCAAT
TCTGAATACC CTGAAGAGTG TGCATTTATT AACGATTTGA GCACAACGTT ATACCTATAC
TATTACTCTA TCGCCTCGGC ATTAGATTCT GTGTTCCCTG CAAGCAAGTA TTTATTTGGT
ATTTCTTTTC AAGTGCCAGT GAATTGTCAC TTTTTTGATC GCAATATTAC AACAATTCAG
AAAGAGAATA CATACCATCA GAAATTGTTT GATCGTCGGA TTGATAATTT ATTACAGAGG
CATATATATT TTTCGTTGAG ATTATTTTCT TTCTTCAGAA GGAGACATAA TTTCTACCAA
GATCATTTGA CGTGGTCCAA TCCTTTCACA GAACAGTTGA GAGATGACCG TTTTGCATCG
AGATCTGTCA AGGATTCATT TGAGACTCCG ATCAAGAGTT TCAACACGAC ATTAATTAGA
CCAGAGCATT ACCCCACTAA AAGAAGCGAG CTGGAAAACT CCACATTCAC CCGAACTGAC
GACACAATGG TACAGAAAAT GTACACGAGA AATATTGAAA CTCTTGACTT CTTCAATGAA
GGCTCCATAC TACACTTTGA CTACGAAACA CTACTTTTGT TACAGGATTA TAGACCAATT
AGTGAAAATT CCGAATCGAG TGTCCAGATC GATGGGAAAA TCTTGAGAGA GTATTTTGAA
GATAAAACGA TTATTCTCAG CAGTCTACAT TAG
|
|---|
| Protein sequence | MTKVKSQAPR ASTRRRHTNS KLGCLNCKRK KIRCNESLPI CGNCAKGKKE TCSYLSLDQQ
EIDRIRLTHS LRDSQNKLLN LNYRLPTSSN KDSHKFKKVS PVTSATALEF KFELMKLPLR
IPTFAYPPLQ FNNLSMNNFS NEFRVINDFD TSDDSGSSPQ SIVENRMLLG GFVQPTSFTK
LDFKSKVVWG SSPYKNKLRA PLQLDINIFT GMESVADHLR SFIMSINSNS PHTDVLFNTF
VCLGRTIILT YFQHIKQYDS HYQWLQNYIP SFELRCLESH ALALAKLRRA ISHFHSIEAT
KENAEEIEYY TTMLGYCYSY LTAVTFMFKF ESDRYFNSSR GAFTVFQIYF KFTNDHNLEP
SPLFKFLLKN IRINILSVNI PSYNPHFFYE LNDNFKLLGF IFQNQNIKFE DPELSKSYDR
VCYRYKTLLT YLEEEILPHM ILKRNEKFVS TYPPEVIFGG LKKWLSNFPS ETITFRPICN
SEYPEECAFI NDLSTTLYLY YYSIASALDS VFPASKYLFG ISFQVPVNCH FFDRNITTIQ
KENTYHQKLF DRRIDNLLQR HIYFSLRLFS FFRRRHNFYQ DHLTWSNPFT EQLRDDRFAS
RSVKDSFETP IKSFNTTLIR PEHYPTKRSE LENSTFTRTD DTMVQKMYTR NIETLDFFNE
GSILHFDYET LLLLQDYRPI SENSESSVQI DGKILREYFE DKTIILSSLH
|
|---|
| |