Gene PICST_51739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_51739 
SymbolTOA2 
ID4851302 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp1449343 
End bp1449729 
Gene Length387 bp 
Protein Length119 aa 
Translation table 
GC content45% 
IMG OID640393010 
ProductTranscription initiation factor IIA small chain (TFIIA 13.5 kDa subunit) 
Protein accessionXP_001387921 
Protein GI126274293 
COG category[K] Transcription 
COG ID[COG5123] Transcription initiation factor IIA, gamma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAC CAGCCTATTA CGAGCTTTAC CGGAGGTCTA CCGTAGGTGC TACCTTGACC 
GATGCTTTGG ATACGTTGAT TCTGGATGAA AAAATCCAGC CACAGTTGGC CATGAGAATT
CTTGCCAATT TTGACAGGAT CATTTCCGAG AATTTGAAGT TGGAGAATAA CATCGCCAAG
TCTCGGCTTA CTTTCAAAGG CGTATTGTCG ACATATAACT TCTGTGACGA TGTGTGGACA
TTTATCATCA AGAATGTGTT GATCAAGATG AGCGATGTTT CGGCCAATGG TGAAGGGTCC
AGTTCTAACT CGGCAGTGGA TAGCGAGATC ACGGTAGACA AGTTTAAGAT CGTCGCTTGT
AACTCCAAAA GAGCCGGTGA CATCTGA
 
Protein sequence
MSAPAYYELY RRSTVGATLT DALDTLILDE KIQPQLAMRI LANFDRIISE NLKLENNIAK 
SRLTFKGVLS TYNFCDDVWT FIIKNVLIKM SDVSANVDSE ITVDKFKIVA CNSKRAGDI