| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_51733 |
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| Symbol | YHC3 |
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| ID | 4851198 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 1177086 |
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| End bp | 1178357 |
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| Gene Length | 1272 bp |
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| Protein Length | 406 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640392906 |
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| Product | vacuolar CLN3 homolog involved in pH homeostasis |
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| Protein accession | XP_001387870 |
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| Protein GI | 126274184 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00839539 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCTTAA TAGTACCAGA ATCCACAAAA ATCTTCACTT CCTTCTTTCT CTTTGGACTC
CTAAACAATA TCCTTTACGT GGTAATCCTA TCTGCCGCTA TTGACTTGGT TGGTGCTGCT
ACTCCCAAGG CTGTGGTACT ATTGGCTGAT GTTGTCCCAG CTTTTATATT CAAGCTCACT
GCTCCCTTCT TTATTCATAC GATATCGTAT GTCTCGAGAA TATGGTCTCT CGTAGCACTT
TCATCTTTGG GAATGTTATT AATCAGCTTG ACTCCTGAAA GTTCCATCGG CGTCAAAGTG
TTTGGAATAG TTCTAGCTTC GTTTTCCTCG GGGTTTGGAG AAGTTTCGTT TTTGCAATTG
ACCCACTATT ATAACGAAGA AATGTCGCTA GGAGGCTTTG CTAGTGGGAC TGGAGGTGCT
GGTCTTTTTG GCAGCTTCTT GTTCATGTTC ATGACAAACA TCTTGGGAAT CAAGGTATGG
TTAGTACTCT TGCTCTTTGC TTTGGTTCCG CTCGGTTTCC TTGCTACTTT CTACTTGCTC
CTACCATCAC CTGGACTAAG TGAAAATGTG TATGAACCGA TATTCGACGA GGAAACTCAG
ATAGACCCAG TGGAAACAGA GTTAGAGTCT TTGGACCGCA TCGACGGCGA ATTATACGAA
CCTAAGACAT ACAGTCTAGA AAGCTTGAAA CTCCATGTTT CTAAAACTAT AACTCTAATC
ACACCGCTAG TACTTCCGTA CATGCTACCA TTGAGTTCCG TATATGTTTC AGAGTATGTA
ATCAACCAGG GAATATCTCC TACCTTATTG TTTCCTTTGG ACGACTTGCC TCATTGGTTG
TTCTCGACTT ACAGAGATAT TTATGTTGTC TACGGATTCT TGTATCAACT AGGAGTTTTC
ATTCTGCGGT CCTCGATGAA TTTCGGCATA AGAATCAAAC AGCTATATGC GTTGTCATTG
CTTCAGTTCG CCAATGTCGT TATTACACTC TACCAGTCTG TTTACGATGC TCCCTTTAGT
TCCATCTGGC CTCTTATGGG GCTTATTTTC TACGAAGGGC TCCTAGGCGG CTTTCTGTAT
GTAAACACTT TCATGTCAGT TAGTGAAGAC ATACCCAAGA CTGAACGAGA ATTTTCTATG
GGATGTGTTT CCATTAGCGA CAGCTTGGGT ATAGTTTTAG CCGGGTGTAT CAACTGGTGG
CTTGAAACAA AACTTTGCGG CTTGCAAGTG CAAAGGGGCA GGGACTGGTG TCTGAAGGGT
AGCTCCTTTT AG
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| Protein sequence | MSLIVPESTK IFTSFFLFGL LNNILYVVIL SAAIDLVGAA TPKAVVLLAD VVPAFIFKLT
APFFIHTISY VSRIWSLVAL SSLGMLLISL TPESSIGVKV FGIVLASFSS GFGEVSFLQL
THYYNEEMSL GGFASGTGGA GLFGSFLFMF MTNILGIKVW LVLLLFALVP LGFLATFYLL
LPSPGLMETE LESLDRIDGE LYEPKTYSLE SLKLHVSKTI TLITPLVLPY MLPLSSVYVS
EYVINQGISP TLLFPLDDLP HWLFSTYRDI YVVYGFLYQL GVFILRSSMN FGIRIKQLYA
LSLLQFANVV ITLYQSVYDA PFSSIWPLMG LIFYEGLLGG FLYVNTFMSV SEDIPKTERE
FSMGCVSISD SLGIVLAGCI NWWLETKLCG LQVQRGRDWC LKGSSF
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