Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_51354 |
Symbol | |
ID | 4851374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 1633881 |
End bp | 1634615 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | |
GC content | 46% |
IMG OID | 640393082 |
Product | predicted protein |
Protein accession | XP_001387955 |
Protein GI | 126274416 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0278] Glutaredoxin-related protein [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR00365] monothiol glutaredoxin, Grx4 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.955254 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGTCA TCGAGATCCA GTCGGAAGCT CAATTTTCCG AGTTGACCAA GTCGGACCCT TCCAAGCTTA TTGCGCTCTA CTTCCACACA CCATGGGCTG GGCCATGTAA GACAATGAAC TCTGTTTTTA AGACTTTGGC TGATTCTAAA GCGGCCGATC CAACTATCCT CTTTCTCAGC ATTAATGCCG ACGACCTCTC GGAAATAAGT GAGGTTTTTG AAGTTTCCGC TGTTCCATAC TTCATTTTGA TCCGCAACTC GACCATATTG AAAGAGTTAT CGGGCGCTGA CCCCAAGGAA TTTATAAACG CTTTGAACCA GTTTTCAAAC TCAGCTCCGG CTGCTGTTGC TGCCGCCGCA AAGGAAGAAG CTCCTATTAA TAATGGTGTA GGAAATGGAG CTGGAGATGT TTCTGAATCA GAAGAAGCCC TTGATGAAAG ATTAAAGAAG TTGACTGCAG CCGCTCCAAT AATGTTGTTC ATGAAAGGTT CGCCTTCCTC GCCTCAATGT GGCTTTTCCA GACAAATGGT TGCTATCTTG AGAGAACACC AGGTCAGATT TGGATTTTTT GATATCTTGA AGGACGACTC CGTCAGACAA GGCTTGAAGA AGTTTAGCGA CTGGCCCACT TTCCCTCAAT TGTATATCAA CGGAGAGTTC CAGGGAGGTT TGGACATCAT TAAGGAAAGT ATTGAGGAAG ATGACCAGTT CTTCGAGAGA GCTTTGGCTG CGTAA
|
Protein sequence | MAVIEIQSEA QFSELTKSDP SKLIALYFHT PWAGPCKTMN SVFKTLADSK AADPTILFLS INADDLSEIS EVFEVSAVPY FILIRNSTIL KELSGADPKE FINALNQFSN SAPAAVAAAA KEEAPINNGV GNGAGDVSES EEALDERLKK LTAAAPIMLF MKGSPSSPQC GFSRQMVAIL REHQVRFGFF DILKDDSVRQ GLKKFSDWPT FPQLYINGEF QGGLDIIKES IEEDDQFFER ALAA
|
| |