Gene PICST_51354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_51354 
Symbol 
ID4851374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp1633881 
End bp1634615 
Gene Length735 bp 
Protein Length244 aa 
Translation table 
GC content46% 
IMG OID640393082 
Productpredicted protein 
Protein accessionXP_001387955 
Protein GI126274416 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0278] Glutaredoxin-related protein
[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR00365] monothiol glutaredoxin, Grx4 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.955254 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTCA TCGAGATCCA GTCGGAAGCT CAATTTTCCG AGTTGACCAA GTCGGACCCT 
TCCAAGCTTA TTGCGCTCTA CTTCCACACA CCATGGGCTG GGCCATGTAA GACAATGAAC
TCTGTTTTTA AGACTTTGGC TGATTCTAAA GCGGCCGATC CAACTATCCT CTTTCTCAGC
ATTAATGCCG ACGACCTCTC GGAAATAAGT GAGGTTTTTG AAGTTTCCGC TGTTCCATAC
TTCATTTTGA TCCGCAACTC GACCATATTG AAAGAGTTAT CGGGCGCTGA CCCCAAGGAA
TTTATAAACG CTTTGAACCA GTTTTCAAAC TCAGCTCCGG CTGCTGTTGC TGCCGCCGCA
AAGGAAGAAG CTCCTATTAA TAATGGTGTA GGAAATGGAG CTGGAGATGT TTCTGAATCA
GAAGAAGCCC TTGATGAAAG ATTAAAGAAG TTGACTGCAG CCGCTCCAAT AATGTTGTTC
ATGAAAGGTT CGCCTTCCTC GCCTCAATGT GGCTTTTCCA GACAAATGGT TGCTATCTTG
AGAGAACACC AGGTCAGATT TGGATTTTTT GATATCTTGA AGGACGACTC CGTCAGACAA
GGCTTGAAGA AGTTTAGCGA CTGGCCCACT TTCCCTCAAT TGTATATCAA CGGAGAGTTC
CAGGGAGGTT TGGACATCAT TAAGGAAAGT ATTGAGGAAG ATGACCAGTT CTTCGAGAGA
GCTTTGGCTG CGTAA
 
Protein sequence
MAVIEIQSEA QFSELTKSDP SKLIALYFHT PWAGPCKTMN SVFKTLADSK AADPTILFLS 
INADDLSEIS EVFEVSAVPY FILIRNSTIL KELSGADPKE FINALNQFSN SAPAAVAAAA
KEEAPINNGV GNGAGDVSES EEALDERLKK LTAAAPIMLF MKGSPSSPQC GFSRQMVAIL
REHQVRFGFF DILKDDSVRQ GLKKFSDWPT FPQLYINGEF QGGLDIIKES IEEDDQFFER
ALAA